Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01026 ATGCTTCTCCAAGGAGGAACGGGGATTCCCCATCTCAAGTGGTTTGGTGTTGAGGGAGACTACAATGTCATGGTTATTGACCTCCTCGGTCCAAGTCTAGAAGATTTGTTTAATTATTGCAACCGTAAGTTCTCATTGAAGACAGTGTTAATGCTTGCTGATCAATTGATTAACAGAGTCGAATATATGCATTCAAGAGGTTTTCTTCACCGGGACATAAAGCCAGACAATTTTTTAATGGGCTTAGGCCGCAAAGCAAATCAGGTATACATTATTGACTATGGCCTTGCGAAAAAGTATAGGGATCTTCAAACTCATAGACACATACCATACAGGGAAAACAAGAATCTTACTGGTACAGCACGCTATGCAAGTGTCAACACACATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGCTATGTGCTCATGTACTTCTTAAGGGGAAGTCTTCCCTGGCAGGGACTTAAGGCTGGCAACAAAAAACAAAAATATGATAGAATCAGTGAGAAGAAAGTATCAACTCCCATAGAGGTTCTCTGCAAATCATATCCTGCTGAGTTTGTATCATACTTCCATTACTGCCGTTCTTTGCGGTTTGAAGACAAGCCAGATTATTCATATCTAAAGAGACTTTTCCGTGACCTGTTTATTCGAGAAGGCCATCAATTCGACTATGTTTTTGACTGGACTGTACTGAAGTATCCACATGTTGGCGACAGCAGCTCTAGAGGGCGGAATGGTGCCGGCAAGGCAGCTATGAATGCTGGGCCAACTGCATACAAACCTGAAAAGATCTCAGTTGGAAGAGATAGCCGAGAGCAATACGATGTATACGACCGGAGGAACCAAATGACTAGCCCTCCTGTTGATCACATGAGATACAGAAGTTCTGACGATGTAGCAATACACAGGGATATGCACCATGATGAATATGACGAATACAATACAACTCGTTATGCGAGCACTTCAAGAAGGGCTATAGTCACATCAAATAAGCATGTTTCCTCAGGCGACTATGGTTATGCTGGGATGACACCGAGTAGGGGCTACGGTGGGATGACCCCAAGTAGAGGCTACGGTAACCCTGGCATGACCCCAAGTAGGGGTCATCCCACCGGTCATGCCGGTAACCCTGGCATGACCCCGAGCAGGGGCCATCCAACCACCACACATCGGATTCAACCTATTTATGAGACCAAACCAGCAACTTTTACTCGCAATGGATCTACAAGACGCCAGCGTGATGAAACTCTAAGGAACTTCGAGCACCTTAATATCAGGAAGTAA 1302 0.4462 MLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGNKKQKYDRISEKKVSTPIEVLCKSYPAEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGHQFDYVFDWTVLKYPHVGDSSSRGRNGAGKAAMNAGPTAYKPEKISVGRDSREQYDVYDRRNQMTSPPVDHMRYRSSDDVAIHRDMHHDEYDEYNTTRYASTSRRAIVTSNKHVSSGDYGYAGMTPSRGYGGMTPSRGYGNPGMTPSRGHPTGHAGNPGMTPSRGHPTTTHRIQPIYETKPATFTRNGSTRRQRDETLRNFEHLNIRK 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01026 433 PANTHER CASEIN KINASE-RELATED 1 343 - -
Aip02g01026 433 MobiDBLite consensus disorder prediction 246 267 - -
Aip02g01026 433 Pfam Protein kinase domain 20 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01026 433 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 343 - -
Aip02g01026 433 ProSiteProfiles Protein kinase domain profile. 1 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01026 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 68 80 IPR008271 GO:0004672|GO:0006468
Aip02g01026 433 Gene3D Transferase(Phosphotransferase) domain 1 3 279 - -
Aip02g01026 433 MobiDBLite consensus disorder prediction 359 395 - -
Aip02g01026 433 SMART serkin_6 1 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01026 433 SUPERFAMILY Protein kinase-like (PK-like) 3 234 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01026 Aip-Chr2 18963062 18970528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01026 35 225 MAP Kinase Kinase Kinase AT1G62400 28.426 1.25e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Aip02g01026 Pkinase 1.1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01026 K08960 K08959 gmx:100789031 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g01026 02 18963062 18970528 Aip02g01026 02 18963062 18970528 ECH
Aip06g01415 06 23169793 23175287 Aip02g01026 02 18963062 18970528 PCT