Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01014 ATGGATTCGGCGAGGAGTTGGTTTCAGAAGTTTCAGCCTCGTGATAAAACAAAAGGGTTTGGAAAGAAGAAGGAGGATGATAACAACGGAGGAGGAGCAGACGATTCGAGTGTAGTGGTTGATGAAGCTTCTCTTTCCAATGACACAAAGCAGAAGGTTGCAGCAGCAAAGCAGTATATTGAAAACCATTACAAGGAGCAAATGAAGAATCTTCAGGAGAGGAAGGAGCGTCGTACCTTTTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCTGAGGAAGATCAAAACAACCTACTTAAATTTTTGGAAAAAAAGGAAACTGAATATATGCGCCTTCAAAGGCATAAGATGGGAGTTGATGATTTTGAATTGCTGACTATGATTGGCAAAGGTGCATTTGGTGAGGCCAGGTTTGTTGTCATTTGTCTTGCTAGATTATTCTCTCCTATTGAATATGATTTTTTACACTTATGTCAGTGTATCATTCATTATTTTGTAAATTGTCAGGTTGAACATGTCAGAGCTGAAAGGAATCTACTTGCTGAGGTTGACAGCAATTGCATAGTCAAACTGTATTGTTCTTTTCAGGATGATGAGCATCTATATCTTATTATGGAGTACCTTCCAGGTGGGGATATGATGACACTGCTTATGAGAAAGGATACCTTGACAGAAGATGAAGCCAGATTTTATGTAGCAGAAACAATTCTGGCTATTGAATCTATACATAAACACAATTATATACATAGGGATATCAAGCCTGACAACTTAATACTGGATAGATATGGACACTTGAGACTGTCTGATTTTGGACTTTGTAAACCATTAGATTGTAGTACAATTGCAGAAGGGGATTTTTCTGTGGTTCCGAATGTGAATGGATCTAATGAACGTGTTATTTCAAAACGCACACAGCGAGAACAATTACAACACTGGCAACAGAACAGGAGGACACTTGCTTATTCCACTGTTGGTACACCAGATTATATTGCTCCAGAAGTTCTATTGAAGAAAGGTTATGGAATGGAATGTGATTGGTGGTCACTTGGAGCTATTATGTATGAGATGCTGGTAGGATATCCACCATTTTATTCTGATGATCCGATGACAACATGTAGGAAGATAGTAAACTGGAGATCTCACTTGAAATTTCCCGAAGAAGCAAGGCTGTCCCGAGAGGCTAAAGATCTAATTTGTAAACTTCTGTGCAATGTAAACCACAGGTTGGGGTCCAAAGGTGCAGATGAAATAAAGGCTCACCCATTCTTCAATGGTGTTGAATGGGATAAGCTGTATCAAATAGAAGCTGCATTTATTCCAGAAGTAAATAATGAGCTAGATACTCAGAACTTTGAGAAGTTTGAAGAGTCAGACATCCAAACTCAATCATCATCAAGACATGGTCCGTGGAGGAAGATGCTTTCATCTAAGGACTTGAATTTTGTTGGATACACATACAAGAACTTTGAAATTGTCAACGACTATCAAGTTCCTGGGATGGCTGAACTAAAGAGGAAACAGAACAAAACAAATAGGCCATCCATTAAGTCACTCTTTGAGTCTGATTCAGAGATATCAGAATTATCTGAAGTTCCTGAAACATCTTCAACCAGACAATCTTCTCAAGGAAGCTTTATGAAGCTCTTGCCACCCCAATTAGAGGAGCTAGTGGAGGTGACGAAGATGTGTAGGGAGATGAAGAGGATGGTGCCGGAGATATTGGAGGTGGAGGTTGATCCGAAGGGAGGGCCGGGGATAGTGGAGGCCGCGACGAGGGTTTATGCTGAAAAGGAGAGTGTGGTGGAAGTGTTGCAAGCGATGCAGGGAATAGAGGCGGCGATGAAGAGATCCTTCTTCGATTATAAGCAGGTTGTGGCAGCGGTGATGGGAGTGCTGAGGCTGGCGAGAACTGAGCTGGTTCTGACGACTTGCTGA 1935 0.4124 MDSARSWFQKFQPRDKTKGFGKKKEDDNNGGGADDSSVVVDEASLSNDTKQKVAAAKQYIENHYKEQMKNLQERKERRTFLEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEARFVVICLARLFSPIEYDFLHLCQCIIHYFVNCQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEHLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETILAIESIHKHNYIHRDIKPDNLILDRYGHLRLSDFGLCKPLDCSTIAEGDFSVVPNVNGSNERVISKRTQREQLQHWQQNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMTTCRKIVNWRSHLKFPEEARLSREAKDLICKLLCNVNHRLGSKGADEIKAHPFFNGVEWDKLYQIEAAFIPEVNNELDTQNFEKFEESDIQTQSSSRHGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMAELKRKQNKTNRPSIKSLFESDSEISELSEVPETSSTRQSSQGSFMKLLPPQLEELVEVTKMCREMKRMVPEILEVEVDPKGGPGIVEAATRVYAEKESVVEVLQAMQGIEAAMKRSFFDYKQVVAAVMGVLRLARTELVLTTC 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01014 644 SUPERFAMILY Protein kinase-like (PK-like) 95 476 IPR011009 -
Aip02g01014 644 MobiDBLite consensus disorder prediction 9 31 - -
Aip02g01014 644 Gene3D Phosphorylase Kinase; domain 1 49 144 - -
Aip02g01014 644 Gene3D Transferase(Phosphotransferase) domain 1 211 440 - -
Aip02g01014 644 MobiDBLite consensus disorder prediction 1 50 - -
Aip02g01014 644 SMART pkinase_C_6 424 488 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aip02g01014 644 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 534 - -
Aip02g01014 644 Pfam Protein kinase domain 169 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01014 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Aip02g01014 644 CDD STKc_NDR_like 120 487 - -
Aip02g01014 644 SMART serkin_6 122 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01014 644 Coils Coil 64 84 - -
Aip02g01014 644 Pfam Hs1pro-1 protein C-terminus 554 636 IPR009743 -
Aip02g01014 644 ProSiteProfiles AGC-kinase C-terminal domain profile. 424 496 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aip02g01014 644 Gene3D Phosphorylase Kinase; domain 1 156 210 - -
Aip02g01014 644 ProSiteProfiles Protein kinase domain profile. 122 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g01014 644 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 534 - -
Aip02g01014 644 Pfam Protein kinase C terminal domain 442 486 IPR017892 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01014 Aip-Chr2 18613394 18622900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01014 1 519 AGC Kinase Gene Family AT2G20470 75.048 0.0 799
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Aip02g01014 Pkinase 5.5e-52 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g01014 02 18613394 18622900 Aip02g01014 02 18613394 18622900 ECH