Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01012 ATGGCGGTAGAAGAAGAAAAGGAAGGTTCTATGGGAATCAGAGTGCATGGAATGCAATTCTCTTACGAATGGCAATCGCCTCTGTTCGTTGATTTCAAGCTCAACGTCTCTCCTGGATCTCGATGCCTTCTCCTTGGTGCCAATGGATCCGGGAAGACTACATTGCTGAAGATTTTAGCTGGAAAGCACATGGTTGGAGGAAGAGATGTTGTGCGGGTGTTGAATGGTTCTGCTTTCCATGACACTCATCTAGTATGTAGTGGTGATCTTGCTTACTTGGGGGGATCATGGAGTAAAACCATTGGTTCTGCTGGAGATGTTCCACTTCAAGGAGACTTTTCTGCTGAACATATGATCTTTGGAGTTGAGGGTGCTGATCCGGACAGGAGAAATAAGTTGATTGAACTGCTTGATATAGATCTTCAGTGGCGAATGCATAAGGTATCTGATGGGCAGCGGCGTAGAGTGCAAATATGTCTTGGTCTGCTTCATCCATTTAAGGTTCTCTTGCTGGATGAAGTTACCGTTGACTTGGATGTCGTTACCAGGATGGATTTGTTAGAGTTCTTCAAGGAAGAATGTGAACAGAGACAAGCTACAATTGTATATGCAACTCACATTTTTGATGGACTGGAGACATGGGCAACTCATTTGGCATACATACAAGCCGGTGAGCTGAGGAAAGCAGAAAAATTATCCGATGTCGACGAGTTGAAGTCTTCAGCCAATCTGCTATCTGTTGTTGAAACTTGGCTCCGTGCCGAAACAAGGAACGAAAAGAAGAAGCCTGTTCAAAATACTGCCCAAACACAAAAGACTTCTGTTGCTAGTTCTCCATTCTTTTCATCAAGGCACATGGCATATTATCGATAG 873 0.4399 MAVEEEKEGSMGIRVHGMQFSYEWQSPLFVDFKLNVSPGSRCLLLGANGSGKTTLLKILAGKHMVGGRDVVRVLNGSAFHDTHLVCSGDLAYLGGSWSKTIGSAGDVPLQGDFSAEHMIFGVEGADPDRRNKLIELLDIDLQWRMHKVSDGQRRRVQICLGLLHPFKVLLLDEVTVDLDVVTRMDLLEFFKEECEQRQATIVYATHIFDGLETWATHLAYIQAGELRKAEKLSDVDELKSSANLLSVVETWLRAETRNEKKKPVQNTAQTQKTSVASSPFFSSRHMAYYR 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01012 290 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 13 248 IPR003439 GO:0005524
Aip02g01012 290 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 9 290 - -
Aip02g01012 290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 235 IPR027417 -
Aip02g01012 290 SMART AAA_5 38 225 IPR003593 -
Aip02g01012 290 Pfam ABC transporter 32 175 IPR003439 GO:0005524
Aip02g01012 290 PANTHER ABC TRANSPORTER I FAMILY MEMBER 21 9 290 - -
Aip02g01012 290 Gene3D - 11 275 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01012 Aip-Chr2 18576371 18581002 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g01012 18 202 Calmodulin-binding Proteins AT2G36910 21.717 4.50e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01012 K12608 - gmx:100788503 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g01012 02 18576371 18581002 Aip02g01012 02 18576371 18581002 ECH