Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00996 ATGAAAGCGCAAGCGAGAGAACAGAGAGTGAGAGGGGGTCACCGCCGCAACGCCGCTGCAGTCGCCGCCATCACCGTCGTGGAGGAGGGAGTCCGGAGGAGAGAGAGAGAAAGACGATTCGCAAACGAGATGGAGAGAGAGGACGAAGACGCGACGCGAGAGAGAAGGAGGCTGTTCCGCCGTGCACTGTCATCGCTCCTGGGGTCAATTGAAGCCGCCGCCGCTGCTAGGGCTTGCCCTGCTCCTGTCCTCACTTTCGGCTTCTACGATTACTTCCTGCGTTTCATCGGTGCCGTTTTCGATGCCAAGGGTGCGGATGCAATTCTCTCCTTTGAAAAGTTCTGTTGCAATCTCCCCAGACCTCTTCTTCAGAGCATGTTAGCTGGTTTGGAATCACTTCTAGAAGCTTATCAGCAAAGAATGGCGTCCATGATGGAACAAGTTCAAATCCGTGACAGGTTGCATCCAAAAAAAGTTCAGGAGAAGTTCCTTCAAGAGAGAATTAAAGTTGGTGGCAAAGCTGGTGCTCTTGGTGATTCTGTCATTGTCTCCCGTGAGAAGAACAAGAGATGA 573 0.5253 MKAQAREQRVRGGHRRNAAAVAAITVVEEGVRRRERERRFANEMEREDEDATRERRRLFRRALSSLLGSIEAAAAARACPAPVLTFGFYDYFLRFIGAVFDAKGADAILSFEKFCCNLPRPLLQSMLAGLESLLEAYQQRMASMMEQVQIRDRLHPKKVQEKFLQERIKVGGKAGALGDSVIVSREKNKR 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00996 190 Coils Coil 41 61 - -
Aip02g00996 190 Gene3D - 144 190 IPR038526 -
Aip02g00996 190 Pfam Ribosomal L22e protein family 151 188 IPR002671 GO:0003735|GO:0005840|GO:0006412
Aip02g00996 190 Coils Coil 127 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00996 Aip-Chr2 18021624 18023394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00996 150 189 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 65.000 2.30e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00996 K20003 K02891 aip:110270842 113.62