Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00968 ATGCCCCTCTTTGACCCACCTAGGCATGATAGTGCCGAAACAATATGGAGGGCACTATATCTCGGAGTAAATGTCAAAATGATTACAGGTGATCAACTAGCTATAGGAAAGAAAACAGGACGACGCTTGGGAATGGGTACCAATATGTACCCTTCATCTGCTTTACTTGAACAGGACAAGGATGAATCTATTGCTGCCTTGCCTATTGATGAACTAATCGAAAAAGCAGATGAATTTGCTGATGTATTTCCTGATATGTCTCGATACTATCCCGGGGACTTCATGTGTACTCGAATAAGTATTAATATGATTGTTGTTTTATATTTTTTGTCAGAACACAAGTATGAGCTTGTGAAGCATTTGCAAGTGAGGAAACATATCTGTGGAATGACTGGTGATGGAGTGAATGATGCACCTACTCTAAAGAAGGCAGACATTGGTATAGCTGTCGCCGATGCCACAGATGCTGCTCGTAGTGCATCTGATATTGTTTTAGTAATAGGATGA 507 0.4063 MPLFDPPRHDSAETIWRALYLGVNVKMITGDQLAIGKKTGRRLGMGTNMYPSSALLEQDKDESIAALPIDELIEKADEFADVFPDMSRYYPGDFMCTRISINMIVVLYFLSEHKYELVKHLQVRKHICGMTGDGVNDAPTLKKADIGIAVADATDAARSASDIVLVIG 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00968 168 PANTHER PLASMA MEMBRANE ATPASE 111 165 - -
Aip02g00968 168 PANTHER PLASMA MEMBRANE ATPASE 1 85 - -
Aip02g00968 168 PRINTS P-type cation-transporting ATPase superfamily signature 21 31 - -
Aip02g00968 168 PRINTS P-type cation-transporting ATPase superfamily signature 131 150 - -
Aip02g00968 168 PRINTS P-type cation-transporting ATPase superfamily signature 154 166 - -
Aip02g00968 168 Gene3D - 5 85 IPR023214 -
Aip02g00968 168 Gene3D - 111 166 IPR023214 -
Aip02g00968 168 SUPERFAMILY HAD-like 3 165 IPR036412 -
Aip02g00968 168 PRINTS H+-transporting ATPase (proton pump) signature 103 119 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip02g00968 168 PRINTS H+-transporting ATPase (proton pump) signature 131 147 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip02g00968 168 PRINTS H+-transporting ATPase (proton pump) signature 162 168 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip02g00968 168 PANTHER CALCIUM-TRANSPORTING ATPASE 1 85 - -
Aip02g00968 168 PANTHER CALCIUM-TRANSPORTING ATPASE 111 165 - -
Aip02g00968 168 Pfam haloacid dehalogenase-like hydrolase 57 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00968 Aip-Chr2 17088082 17088771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00968 1 165 Primary Pumps ATPases AT3G47950 75.152 4.21e-75 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00968 K01535 - aip:107626951 319.701