Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00967 ATGGAGGGAGGGAAATCATCATCATCGTCGTCGTCCTCAATTTCTAATGGCAATAATGTTGAAGTAAGGTATAGAGGGATTCGTAGGAGGCCATGGGGAAAATTTGCGGCGGAAATTCGTGACCCGACAAGAAAGGGGACAAGAATATGGCTTGGAACATTTGAAACTGCTGAAGAAGCTGCAAGGGCTTATGATGCTGCTGCTTTTCATTTCCGTGGCCATAGGGCCATTCTCAATTTCCCAAATGAGTATCAAGCTCCTCTTAACCCTAATTCGTCCTTGCCTTTGCCTTTGCCTCTTTCTGTTCATCCTCCTCCTCCTCCTCCTCCTCATTCGAACACGAATGCATATAATTTGGGTTCGTATTCGAATGAGGGGATAGTGCAAGGTGATCATAGTCATGATCGTGCTTTTGAATTAGAGTATTTGGACAATAAGTTGTTGGAAGAACTACTCCAACAAGCTCAAGATGATGATAGGTATATATACCAGTGCAATGATCATCATACATTTTACAGATAA 522 0.4272 MEGGKSSSSSSSSISNGNNVEVRYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFETAEEAARAYDAAAFHFRGHRAILNFPNEYQAPLNPNSSLPLPLPLSVHPPPPPPPHSNTNAYNLGSYSNEGIVQGDHSHDRAFELEYLDNKLLEELLQQAQDDDRYIYQCNDHHTFYR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00967 173 Pfam AP2 domain 23 74 IPR001471 GO:0003700|GO:0006355
Aip02g00967 173 Gene3D AP2/ERF domain 22 83 IPR036955 GO:0003700|GO:0006355
Aip02g00967 173 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 23 151 - -
Aip02g00967 173 PANTHER DNA-BINDING DOMAIN 23 151 IPR044808 GO:0003700|GO:0009873
Aip02g00967 173 SUPERFAMILY DNA-binding domain 23 82 IPR016177 GO:0003677
Aip02g00967 173 SMART rav1_2 23 87 IPR001471 GO:0003700|GO:0006355
Aip02g00967 173 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Aip02g00967 173 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Aip02g00967 173 ProSiteProfiles AP2/ERF domain profile. 23 81 IPR001471 GO:0003700|GO:0006355
Aip02g00967 173 CDD AP2 23 82 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00967 Aip-Chr2 17044616 17045217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00967 18 152 AP2-EREBP Transcription Factor Family AT3G23230 51.111 3.51e-39 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aip02g00967 AP2 2.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00967 - - aip:107628225 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00120 06 1148894 1149273 Aip02g00967 02 17044616 17045217 PCT