Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00958 ATGATGACTATTGAGGAAATGGCTGGGATGGATCTCCTCTGTAGTGACAAAACTGTAACCTTGACATTGAATAAGCTCAGTGTTGATAGAATCTTGATTGAGGTTGCTATAGGTGCTGCAATTGTTGGGATGCTTGCTGATCCAAAGGAGGCTCAAGCTGGAATCAGGGGGGTCCATTTTCTTCCATTCAATCCTGTAGACAAGAGGATTGCTCTAACTTACATTGATTCTGATGGAAATTGGCCCCGTGTGAGAAAAGGGGCTCCGGAGAAGATCATAACCCTTTGCAACTGCAAAGAGGATGTCAGGAAGAAGGTTCATGCAGTGATTAATAAGTTTGCTGAGCATGGACTTCGGTATTTAGGTGTTGCAAGACGCATATTGTAA 387 0.4341 MMTIEEMAGMDLLCSDKTVTLTLNKLSVDRILIEVAIGAAIVGMLADPKEAQAGIRGVHFLPFNPVDKRIALTYIDSDGNWPRVRKGAPEKIITLCNCKEDVRKKVHAVINKFAEHGLRYLGVARRIL 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00958 128 Gene3D - 37 126 IPR023299 GO:0000166
Aip02g00958 128 Gene3D - 26 35 IPR023299 GO:0000166
Aip02g00958 128 PANTHER PLASMA MEMBRANE ATPASE 1 35 - -
Aip02g00958 128 PANTHER CALCIUM-TRANSPORTING ATPASE 36 126 - -
Aip02g00958 128 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 13 127 IPR023299 GO:0000166
Aip02g00958 128 PANTHER PLASMA MEMBRANE ATPASE 36 126 - -
Aip02g00958 128 PANTHER CALCIUM-TRANSPORTING ATPASE 1 35 - -
Aip02g00958 128 Gene3D - 11 25 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00958 Aip-Chr2 16753877 16754503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00958 1 126 Primary Pumps ATPases AT2G24520 64.667 4.40e-60 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00958 K01535 - gmx:100794372 199.134