Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00955 ATGAATACTCCTTTCTTTGAGATCCAAGATTGGAACATGTCCCATGATGTTTTTCCAGACAATTTTTGTTTTGAACCATTCACAAGCAATGATTTTGTTGATGACCCTTTTCATCATTCTCTTTCCTTTGATATGATTGATGAATCCTACATGGATTCATCAACAACAACAGCCATGGAGAACAACAACAACATCATCAAGAACAAGAACAAGAACAAGAAGAAAGAGAATATTGAAGTTGGTAAGGGAAGTGGAGGTTACATAGGAGTTCGGAAAAGGCCATGGGGGAAATTTGCAGCAGAAATAAGAGACAGAACAAGGAATGGAAGAAGGGTTTGGCTTGGAACATTCGAGAGTGCAGAAGATGCTGCTTTGGCTTATGATCAAGCTGCATTCTCCATGAGAGGCTACAACGCTGTTCTCAACTTTCCATTCAAAAGGGTTAAAGATTCTTTGCAAGGAATGATCATGGATTCTGATTCTTGTTCTGGTTCTTCACCTGCACTTGCACTCAAAGAGAGGAATTGGATCCAAAGGAAGTTGTCAAAGACTAACAAGAAAAGGGAATCATCAGAGAAATCTTCATCATCATCAACAACTAATGTGATGGTGTTTGAGGATTTGGGGGTTGAATATCTAGAACAACTGCTTAGCATTTCAGATCAAAATACCACCACAACTTAG 684 0.3889 MNTPFFEIQDWNMSHDVFPDNFCFEPFTSNDFVDDPFHHSLSFDMIDESYMDSSTTTAMENNNNIIKNKNKNKKKENIEVGKGSGGYIGVRKRPWGKFAAEIRDRTRNGRRVWLGTFESAEDAALAYDQAAFSMRGYNAVLNFPFKRVKDSLQGMIMDSDSCSGSSPALALKERNWIQRKLSKTNKKRESSEKSSSSSTTNVMVFEDLGVEYLEQLLSISDQNTTTT 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00955 227 PRINTS Ethylene responsive element binding protein signature 87 98 IPR001471 GO:0003700|GO:0006355
Aip02g00955 227 PRINTS Ethylene responsive element binding protein signature 110 126 IPR001471 GO:0003700|GO:0006355
Aip02g00955 227 SUPERFAMILY DNA-binding domain 86 145 IPR016177 GO:0003677
Aip02g00955 227 PANTHER DNA-BINDING DOMAIN 22 219 IPR044808 GO:0003700|GO:0009873
Aip02g00955 227 ProSiteProfiles AP2/ERF domain profile. 86 144 IPR001471 GO:0003700|GO:0006355
Aip02g00955 227 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 22 219 - -
Aip02g00955 227 CDD AP2 87 144 IPR001471 GO:0003700|GO:0006355
Aip02g00955 227 SMART rav1_2 86 150 IPR001471 GO:0003700|GO:0006355
Aip02g00955 227 Pfam AP2 domain 86 136 IPR001471 GO:0003700|GO:0006355
Aip02g00955 227 Gene3D AP2/ERF domain 86 146 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00955 Aip-Chr2 16651179 16651862 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00955 26 225 AP2-EREBP Transcription Factor Family AT3G23240 46.269 1.09e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aip02g00955 AP2 3.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00955 K14516 - gmx:100812017 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00955 02 16651179 16651862 Aip02g00955 02 16651179 16651862 ECH