Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00940 ATGAGATCTTCGTTAGAGGCTTCACCATCTTCATCATGCAGATCGAAGAAACACAAGGATCTGAGCTCAAAACTCGTTTCTTCAGATTCGGTTTCGCTCAATACCAAGACACCGGAGAAGCCACCGGAGCTGACGCGCCACACGCGCCGCACGCGCAATCGTGGCGTAGCGCTCTCGTTGTCGGAGGTGCGGAGAGTTGCCAAGGGCCTCCAGGAGCAGCGCGGCCATGAAACGACGTCGTTTGGCGACAAATCTGCGAGGAGGCAGATCGAGCTGCGTTCGCCGAGCAAACCACAAAAAACCAGTTCCGATGAAGAAGAAGCCTTCAAGCTTCCCGAAAAGTATGAGATTTTGGGCGAGTATTTTGCTAGGTTGGATTGTTCGATTCGATTGCTGCGCATGAAAGGAATGACACCGTCTTTCTCCAAAATCAGCCACAAGATTGAAAGTTTAACTGATAGGAGGTTTACACTTGGTCATTTGGCTCAGTTGAAATTCGTGTTGCCCGAGGCAATTGTGGCTAAGAAGGTTTTAGTGTTTGATGAGAAGACAAGTTGTATGAAGCCAGATCTGCATGTCACTATTAACTATGATGCGGTGGAGTATGAATCAAAGTCGCCAACCGAAGGCGGCCGGGGCATGCTGTTGAGGAAGTTGTTCCGTGCACGGCTGAGAGATTTTGTTGAATCCCATCCTGGGGGAGATGAAATTCCGGAAGAAGCGCTACCCGAACCATTCAACCCAAAGCAACATCGTCTATCAGACATATTGACAAGGCCTTTCTCATCTAAGGCGACAATATCGGATGCAGATGTAGCTCACCCTTCAACAGTATCATCGGCAGTCATTCCGGATAATGACACTGAAATAGACTTAGAACCTGTTAGGACATCAATTGAATCCCTTAACCAGCAACCATCAGCAGCCTCTCATGTGCCTCAATCTTTCAGAAGACGGTTCTCTCAGAGGTTGAAGGAAAATGGAACAGATAAAAATGCACTGGAAAAATTGCCATCAGATTCATTGCAAACCGTGGTTTTACCGGATTCAGAGTCAAGCCTGAGTGAAAAACCTACCTCAGAAGGAGCCAGTAATGAAGTATGCCTCACAAATTGTTCTTCATCTAGTGCTCCACTTGCTACTCCATGCAAAACCATTGAACATACAGAAAATAATGGGTCTCAAAAATGCTTTGATGCTGTGTCAACCCCAGCCAAATGTATTTCTACTCCAGCCAGCATAACACCTGCATTGCCTACGCCTCCTAAGAGACAATTCATGAGTCCAGAGGATAACTCTTCCACTACTACTAACAAGTTGGTTAGGCGCCCACCTCCATCGTTAAGGTCGTTGAAATTCGAAACTCCGGTTAAAAATAAGGTTGCAGAGAAAGAGAAATTTGAAACTCCAGTTAAAAATAAGGAGGCAGAGGAAGAATATGATGATCTTTTGGATGTTCTCCCTGAGAGTCTTCTGCAATCGATTAGAGAAAAGGAAATACAAGCAATGGAGGAAAGAGATCCAGCTATTTCACAAGCAAAGAGACGGCGAAAAATGATAGCTGGCCTACCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGATTTTGTTGATAGAAGAGAAGTAG 1635 0.4465 MRSSLEASPSSSCRSKKHKDLSSKLVSSDSVSLNTKTPEKPPELTRHTRRTRNRGVALSLSEVRRVAKGLQEQRGHETTSFGDKSARRQIELRSPSKPQKTSSDEEEAFKLPEKYEILGEYFARLDCSIRLLRMKGMTPSFSKISHKIESLTDRRFTLGHLAQLKFVLPEAIVAKKVLVFDEKTSCMKPDLHVTINYDAVEYESKSPTEGGRGMLLRKLFRARLRDFVESHPGGDEIPEEALPEPFNPKQHRLSDILTRPFSSKATISDADVAHPSTVSSAVIPDNDTEIDLEPVRTSIESLNQQPSAASHVPQSFRRRFSQRLKENGTDKNALEKLPSDSLQTVVLPDSESSLSEKPTSEGASNEVCLTNCSSSSAPLATPCKTIEHTENNGSQKCFDAVSTPAKCISTPASITPALPTPPKRQFMSPEDNSSTTTNKLVRRPPPSLRSLKFETPVKNKVAEKEKFETPVKNKEAEEEYDDLLDVLPESLLQSIREKEIQAMEERDPAISQAKRRRKMIAGLPXXXXXXXXXXXXLILLIEEK 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00940 544 MobiDBLite consensus disorder prediction 25 39 - -
Aip02g00940 544 MobiDBLite consensus disorder prediction 1 106 - -
Aip02g00940 544 MobiDBLite consensus disorder prediction 231 258 - -
Aip02g00940 544 MobiDBLite consensus disorder prediction 297 315 - -
Aip02g00940 544 Pfam DNA replication factor CDT1 like 111 194 IPR014939 -
Aip02g00940 544 MobiDBLite consensus disorder prediction 67 106 - -
Aip02g00940 544 MobiDBLite consensus disorder prediction 426 443 - -
Aip02g00940 544 Gene3D - 470 528 IPR038090 -
Aip02g00940 544 PANTHER DNA REPLICATION FACTOR CDT1 17 525 IPR045173 GO:0003677|GO:0030174|GO:0071163
Aip02g00940 544 SUPERFAMILY "Winged helix" DNA-binding domain 100 246 IPR036390 -
Aip02g00940 544 MobiDBLite consensus disorder prediction 412 448 - -
Aip02g00940 544 CDD Cdt1_m 95 247 IPR014939 -
Aip02g00940 544 SMART CDT1_2 111 244 IPR014939 -
Aip02g00940 544 MobiDBLite consensus disorder prediction 278 315 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00940 84 258 Core DNA Replication Machinery Family AT3G54710 47.727 1.24e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00940 K10727 - gmx:100778818 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00940 02 16332032 16335497 Aip02g00940 02 16332032 16335497 ECH