Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00939 ATGGGTAGTACCAACAACTTGCACCAATTATTGAGATTATTGTGTTTGAATACTGATTGGAATTCCGCAATCTTTTGGAAGCTCCAACATCGTGCTAGGATGATGCTGACATGGGAGGATGCTTACTATGACAATCCTATTGGTAACGACTCCTCTGAAAACTTGCGCTGCCAGAAGACCTTGGAACAGATTGGCAGTGCGAAGTTTTCCCATGACCCTCTTGGATTGGCCATTGCAAAGATGTCATGTCATGTATATTCATTAGGGGAAGGTATTGTTGGACAAGTAGCTGTTACTGGAAAGTATCGGTGGATCCGTGCAGATAATCTAGTTGCTGACTCTAGCATAGCTTTTGAGTTTGCTGGTGCATGGCAATCTCTGTTTTCTGCTGGAATTAGGACCATTGTCGTTGTAGCAGTAATCCCACTTGGAGTTGTTCAGCTTGGCTCTTTAAATAAGGTTACCGAAGATATGGCAGTTGTAACTAATATAAGAAATCTCTTTTTGTCTACTCAAGATTACACATTAGACTATACACCGAGTCAAATACAAAGTAGCCCCAAAAGCTCTCCATCTCCGGTGGATGCATGTACAAAAGCTTTGTCTTCGAAACTTATGCCTGCATACTTACTTGATACTGAGAACACCATGAAGAGTGAAACACCATACATGTTAATGCCGTTTCAATGTTCCAGGAAGAACGATTCACCTCAAGATATTTATCAGAAAATGGCTGTTGATGTTGCCAAGCACGAGGGATCTGAAATTGGCAAGGACAGAAGTTCCATTTTGCTTCAGTCAATATCAAATATGATGAATCCGGAGTGTCAAAAATTCGTGGAAATGGAACCTGTAAATGAGAGGAAGTGCGAAGGAATGAATATAAGTGTGGAATCAGAAAGAAAAGTCTCATCATTTCCACACAATATGGTTATGGATAATACAAGCTTCAATGATTTGATGCATCCTTTGGAAAAAATCGGAGCTGATTCTGCTTACCCTTCAGACTTTCTTGATGCAGTTGTTTATGCAAGTGACAAGTTACATTGTGTAGATATCAACCAAAATGGGGTGTCAAACGTGCCGAGGTATTCAGATGCAAACTCTCAAAACAATATAGAGAAGTCAAAGTTTAAGAGTGAGCCTTGCTACAATGATGCCGCACACTCGCTGAAGTTTCCTGTTGGCTGTGAACTACATGAAGCCCTTGGGCCTGGTTTTCTAAAAGGAAGTAACTATTTTGATTCGGCAGCTCAGGTTAAACAAGATGATAGGAATGTTGAGGTGCTAGACGAGATTAGCAGTAGCCAGTTGACTTCGCAATCAAATCCAGAGCATCTTCTGGAAGCAATGGTAGCGAACTTATGCAGGAATAGTAATGATATTAATGGCGAGGTATCATTTTCTACTTCGATGCCATCCGCAATGGCCTCAGGAAGAAATACCGAAACTTCTATTCACTCTATGCACACTATTAACTCGGAAGGCTATTCGATAGATCAGTCACCTCTTGTCAAAGAGGAGAAACAGCGCAGCTTGAGTTCCTCGGCAATATGTGGCGTGATGTCCCCAAAAGGATTTTCTTCTCCATGTCCAAGTTCATGTAGTGAGCAATTTGAGAGGTCTTCCGAACCAGCTAAGAACAGCAAGAAAAGGGCTAGGCCTGGGGAAAGTTGTAGGCCAAGGCCAAGGGACAGACAGTTGATCCAGGATCGCATTAAGGAGTTGAGAGAATTGGTGCCGAACGGAGCTAAGTGCAGTATCGATTCACTACTTGAGTGCACGATAAAGCACATGCTTTTCCTCCAGAGCGTAACTAAGCATGCTGACAAGCTAAATAAAGTTGAGGATGCATCAAAGACAAAGCGGCATCACATGGAAACGGATAGTCTCGGTACCTCTAGTTATCAACAGGGTTCAAGTTGGGCAATGGAGGTAGGAGGCCATCTGAAAGTTCGGTCGATATTGGTTGAGAATCTGAACAAGAATGGGCAGATGCTGGTTGAGATGTTGTGTGAAGAGTGCAGCCATTTTCTTGAGATAGCAGAAGCCATAAGAAGCTTGGGCCTGACGATTTTGAAGGGTGCAACCGAAGCTCGCGGTGAGAAGACGTGTCTATGTTTCGTGGTTGAGCAGGGTCAAAACAACAGAAATTTACACAGATTGGATATCTTGTGGCCACTTGTTCAGATACTGCAATCAAAGAGCACACTACATTCACAATAA 2226 0.4263 MGSTNNLHQLLRLLCLNTDWNSAIFWKLQHRARMMLTWEDAYYDNPIGNDSSENLRCQKTLEQIGSAKFSHDPLGLAIAKMSCHVYSLGEGIVGQVAVTGKYRWIRADNLVADSSIAFEFAGAWQSLFSAGIRTIVVVAVIPLGVVQLGSLNKVTEDMAVVTNIRNLFLSTQDYTLDYTPSQIQSSPKSSPSPVDACTKALSSKLMPAYLLDTENTMKSETPYMLMPFQCSRKNDSPQDIYQKMAVDVAKHEGSEIGKDRSSILLQSISNMMNPECQKFVEMEPVNERKCEGMNISVESERKVSSFPHNMVMDNTSFNDLMHPLEKIGADSAYPSDFLDAVVYASDKLHCVDINQNGVSNVPRYSDANSQNNIEKSKFKSEPCYNDAAHSLKFPVGCELHEALGPGFLKGSNYFDSAAQVKQDDRNVEVLDEISSSQLTSQSNPEHLLEAMVANLCRNSNDINGEVSFSTSMPSAMASGRNTETSIHSMHTINSEGYSIDQSPLVKEEKQRSLSSSAICGVMSPKGFSSPCPSSCSEQFERSSEPAKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLECTIKHMLFLQSVTKHADKLNKVEDASKTKRHHMETDSLGTSSYQQGSSWAMEVGGHLKVRSILVENLNKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILKGATEARGEKTCLCFVVEQGQNNRNLHRLDILWPLVQILQSKSTLHSQ 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00939 741 MobiDBLite consensus disorder prediction 532 568 - -
Aip02g00939 741 MobiDBLite consensus disorder prediction 543 568 - -
Aip02g00939 741 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 5 741 IPR043561 GO:0003700|GO:0006355
Aip02g00939 741 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 5 741 - -
Aip02g00939 741 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 7 168 IPR025610 -
Aip02g00939 741 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 553 602 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00939 Aip-Chr2 16263815 16271301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00939 1 736 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 40.722 1.79e-157 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00939 - - adu:107473585 1456.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00939 02 16263815 16271301 Aip02g00939 02 16263815 16271301 ECH