Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00924 ATGACAGGTTCTGGTTCTCCTTGTGGTGCTTGCAAGTTCTTGAGGAGAAAATGTGTGAGAGGTTGTGTTTTTGCACCTTACTTCTGCCATGAACAAGGTGCTACCCATTTTGCAGCCATTCACAAAGTGTTTGGTGCAAGCAATGTCTCAAAGCTCCTTGCCCATCTTCCGGTCGGCGACCGCTGCGAAGCGGCCGTCACGATTTCGTATGAAGCTCAGGCAAGGCTTCAAGATCCTATCTATGGCTGTGTCTCCCATATCTTTGCCCTTCAGCAACAGGTGGTGAATTTACAAGCACAGCTAGCATATCTTAAGGAACAAGCAGCACAACAAAGTTGTGTGAATGGTGGAAACCCTAATCATGAGAGATACTTTGATAAACCTAATATTGCTGATAACAACAACAATAATTTCATTACTCCTCAAGATCTTCAAAGTTGGTTGTTCAATATGGAAAATTCTTCATCTTCAAACTTGGGTGGCCTTGAATCTCTTCATCCAAATTTGTGCAACAACAATGATTCTTCTTATTATGGTAGTGATGGAAACAACAACAATAACAACAACAATGTTAATAATTCCATGATGATGATGATGGATCTAAAGCCAATTAATAATGATGGGAGTTACTATGAAAATTCAAACTCATTCTCTAGCTTTGAAGAGAGTTCTTCAAACTCCATGTCTTATGACATGGAAACAAATGGTGGGACAAAATGGTCTTTTCATGAAGTTGATGATCTTCATTCAGTGGCCTTTGGTTACAGAAGATAA 774 0.3979 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVGDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLAYLKEQAAQQSCVNGGNPNHERYFDKPNIADNNNNNFITPQDLQSWLFNMENSSSSNLGGLESLHPNLCNNNDSSYYGSDGNNNNNNNNVNNSMMMMMDLKPINNDGSYYENSNSFSSFEESSSNSMSYDMETNGGTKWSFHEVDDLHSVAFGYRR 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00924 257 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 1 256 - -
Aip02g00924 257 Coils Coil 87 107 - -
Aip02g00924 257 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
Aip02g00924 257 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 256 - -
Aip02g00924 257 ProSitePatterns EF-hand calcium-binding domain. 132 144 IPR018247 -
Aip02g00924 257 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00924 Aip-Chr2 15613565 15615211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00924 7 122 AS2 family AT3G58190 81.897 3.01e-68 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aip02g00924 LOB 6.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00924 K13945 - gmx:100776678 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00924 02 15613565 15615211 Aip02g00924 02 15613565 15615211 ECH
Aip06g00125 06 1213232 1214109 Aip02g00924 02 15613565 15615211 PCT