Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00913 ATGAATTCTAGAAGAGACGCCCGGAACAGCAGAGTTGCTCTGTTTGACGGCATTGAGGAGGGAGGCATCCGAGCATCATCACTTTACTCCTCCTATAATGAAATTGATGAACAAGATAACGAGCGAGCAATGGGTGGATTGCAAGATAGAGTCAGTCTGTTGAAAAGAATCTCAAGTGATATACACGAGGAGGTGGATAGTCATAACCGGATGCTGGACCGCATGGGGAATGACATGGATTCTTCAAGAGGAGTTCTTTCAGGAACTATGGACAAATTCAAAATGGTCTTTGAGAAAAAATCCAGCCGAAGAACGTTTTCACTTATAGCATCCTTTGTTGTGCTTTTCCTTATAATATACTATTTGACTAGGTAA 375 0.4187 MNSRRDARNSRVALFDGIEEGGIRASSLYSSYNEIDEQDNERAMGGLQDRVSLLKRISSDIHEEVDSHNRMLDRMGNDMDSSRGVLSGTMDKFKMVFEKKSSRRTFSLIASFVVLFLIIYYLTR 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00913 124 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 34 96 IPR000727 -
Aip02g00913 124 SMART tSNARE_6 29 96 IPR000727 -
Aip02g00913 124 PANTHER - 1 124 - -
Aip02g00913 124 CDD SNARE_Bet1 37 94 IPR039899 -
Aip02g00913 124 PANTHER GOLGI SNARE BET1-RELATED 1 124 IPR039897 GO:0015031|GO:0030173
Aip02g00913 124 SUPERFAMILY SNARE fusion complex 30 96 - -
Aip02g00913 124 Gene3D - 42 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00913 Aip-Chr2 15410686 15413243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00913 35 123 SNARE and Associated Proteins AT1G28490 28.090 5.68e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00913 K08504 - gmx:100500028 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00913 02 15410686 15413243 Aip02g00913 02 15410686 15413243 ECH
Aip02g00913 02 15410686 15413243 Aip06g00129 06 1257026 1260275 PCT