Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00912 ATGGAATTCTACAATAACCTAGAAGACTACTCGAAGAGTTCGTCGAGCGAAGAAACCGATCGGTCGTCGTACGAGCAAGCCGGAGATCATCAAGAGATGGGAACAGGAAGATCCTATGAGTGTGTGTTTTGCAAGAGGGGATTCACCACAGCACAAGCTTTGGGTGGACACATGAACATTCATAGAAAAGATAGAGCCAATAACAAAGCCAAAATTCCAGCTTCTAGTTCAAGCAAGGTTGATGATGAGAACTACTATGCAGATCTAGGGCACTATTCATCACCAATTCCAAGCTATCTTGCAAGAAATGGAAATTATCATCATGAGGAAGCAAGATTTGGATAG 345 0.4261 MEFYNNLEDYSKSSSSEETDRSSYEQAGDHQEMGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRANNKAKIPASSSSKVDDENYYADLGHYSSPIPSYLARNGNYHHEEARFG 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00912 114 Pfam C2H2-type zinc finger 39 63 - -
Aip02g00912 114 MobiDBLite consensus disorder prediction 1 35 - -
Aip02g00912 114 Gene3D Classic Zinc Finger 11 91 - -
Aip02g00912 114 PANTHER OS07G0101800 PROTEIN 5 103 - -
Aip02g00912 114 SUPERFAMILY beta-beta-alpha zinc fingers 37 65 IPR036236 -
Aip02g00912 114 MobiDBLite consensus disorder prediction 13 27 - -
Aip02g00912 114 MobiDBLite consensus disorder prediction 59 80 - -
Aip02g00912 114 ProSiteProfiles Zinc finger C2H2 type domain profile. 39 66 IPR013087 -
Aip02g00912 114 PANTHER TRANSCRIPTIONAL REGULATOR TAC1-LIKE 5 103 - -
Aip02g00912 114 ProSitePatterns Zinc finger C2H2 type domain signature. 41 61 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00912 Aip-Chr2 15403673 15404444 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00912 39 114 C2H2 Transcription Factor Family AT5G43540 43.750 3.60e-15 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aip02g00912 zf-C2H2_6 7.4e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00912 - - aip:107628237 234.572