Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip02g00909 | ATGGAAGGGAAGAACTATTATATGAAGAACAAGAACACTAGTAGTACTACTCATAATAACAATAGCTTTGAGGAGCATTATTCATGGGAAACTTCTTCATCAACACGGCCAACAAGAAGCTATGCTTGTAGCTTTTGCAAGAGAGAGTTCAAATCTGCTCAAGCTTTGGGTGGACACATGAATGTTCATAGAAGGGATAGGGCAAGATTGAGATCTTCATGGATTTCTAATCACACCCCTAAACCTAACCCTAACCCTAATCCTAACCCTACAACAACTCTTGTTTCTTCATCATCATCTCCTTTATCTAATGATCCTATCAATAATTGTTCACATATTTCTCCAATTTATAGCCCTAATTTTTGTCTCAATTTGTCGTCGTCTTCTTCTTCACCCTCCCCGAATTTAGCTTCCATCACAAGAAGTGAAGATAAAAAACCTAGACTCATCATATCTACTCCACAAGTTCTTCCTCTTGTGATGAATAGTCCTCAAAACATGGTGATGATGATGAGTAAGAAAAGCAAAAGTGGTGATTTTGTTGGTGGGGTTGATGATGATGAGAATTACAAGGATAATGTTTTCAAGCACAAGAATGAGCATAACAACATTACCTTGGAGTTGGGAATAGGATTGGTTAAGCACAAAGAGCAGAAGTTGGATTTGGAGCTTAGACTCTAG | 681 | 0.3789 | MEGKNYYMKNKNTSSTTHNNNSFEEHYSWETSSSTRPTRSYACSFCKREFKSAQALGGHMNVHRRDRARLRSSWISNHTPKPNPNPNPNPTTTLVSSSSSPLSNDPINNCSHISPIYSPNFCLNLSSSSSSPSPNLASITRSEDKKPRLIISTPQVLPLVMNSPQNMVMMMSKKSKSGDFVGGVDDDENYKDNVFKHKNEHNNITLELGIGLVKHKEQKLDLELRL | 226 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip02g00909 | 226 | Pfam | C2H2-type zinc finger | 41 | 65 | - | - | |
Aip02g00909 | 226 | Gene3D | Classic Zinc Finger | 10 | 83 | - | - | |
Aip02g00909 | 226 | MobiDBLite | consensus disorder prediction | 7 | 22 | - | - | |
Aip02g00909 | 226 | MobiDBLite | consensus disorder prediction | 74 | 103 | - | - | |
Aip02g00909 | 226 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 43 | 63 | IPR013087 | - | |
Aip02g00909 | 226 | PANTHER | OS07G0101800 PROTEIN | 9 | 226 | - | - | |
Aip02g00909 | 226 | SMART | c2h2final6 | 41 | 63 | IPR013087 | - | |
Aip02g00909 | 226 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Aip02g00909 | 226 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 41 | 68 | IPR013087 | - | |
Aip02g00909 | 226 | PANTHER | TRANSCRIPTIONAL REGULATOR SUPERMAN | 9 | 226 | - | - | |
Aip02g00909 | 226 | SUPERFAMILY | beta-beta-alpha zinc fingers | 38 | 67 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip02g00909 | Aip-Chr2 | 15325670 | 15326350 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip02g00909 | 1 | 226 | C2H2 Transcription Factor Family | AT3G23130 | 32.618 | 2.12e-22 | 89.0 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Aip02g00909 | zf-C2H2_6 | 6.5e-07 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip02g00909 | - | - | ahf:112721869 | 382.104 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip06g00131 | 06 | 1272332 | 1272949 | Aip02g00909 | 02 | 15325670 | 15326350 | PCT |