Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00904 ATGAATAACACCGGGAACGAAGGTACACCTATTGTAGATACCTACGTCACCCCTCTTGTTCTCTCCGCCATCGGGGTAATAGCCATGGTTCTTATAGTTACAACATTCTTCTTCATCTTCTGGTGGCAATACCTTAGGCCGTATCGGGATCAAACTATTAATAACACAGCTTCTGGAAGCCCTGGAAAAAATAATGGAGTCGATGAGGAAATCCTCAAAAAGATCCCTCTTATTACCTACAACAACCGGTGGCAAATAGAACCGGAATGTTCTATTTGCCTCGGCGAGTTGAAGGACGGGGAGGTGCTGAGGTTGTTACCCGCTTGCAACCATGCTTTTCACGTTCCATGCATTGACGAATGGTTCAAGGAGCACACCAATTGTCCCAACTGTCGCTCACTCATCACCTGCGAAGGTAATGAGCCAGAAGATGTATTATGTTCTCAGGAAATCAGTGACGACACTTGGGTAAGGGTGGTCACTCATGGTTATGATGACGATCATAATAACAATGATGACAATGATGACGATGATGCTAGTAATTCTTCCAATTCAACAAACTCGAGATTAGAACGACTTAAACACCCTAGTTCCGTACCATTATGTCACATGAAGAACAATCAATGTTCCTTTGGGATGAAGTTGAAGAGGTCCTTCTCTATGGATCAATCATATCTATGCGTTGCTGTTACCATACAACAAAGAGATCATAGTGTTCATCACCAAGAACTAGAGGCTTCTACCTCTTCTTCTTCATCGAGTAAAAGTAAAGGTATTATGATGATGAACCGCTATAAATCAAGATCATTGTCTATGAAGCATATTGATCAAATGTCTAGGGTGCTCGTAAGACCCCCCTCGCAATTTCGGAATGGTAGCTTTGGGGGATTCAATAATTTCATTCTTCCCTATTGA 915 0.423 MNNTGNEGTPIVDTYVTPLVLSAIGVIAMVLIVTTFFFIFWWQYLRPYRDQTINNTASGSPGKNNGVDEEILKKIPLITYNNRWQIEPECSICLGELKDGEVLRLLPACNHAFHVPCIDEWFKEHTNCPNCRSLITCEGNEPEDVLCSQEISDDTWVRVVTHGYDDDHNNNDDNDDDDASNSSNSTNSRLERLKHPSSVPLCHMKNNQCSFGMKLKRSFSMDQSYLCVAVTIQQRDHSVHHQELEASTSSSSSSKSKGIMMMNRYKSRSLSMKHIDQMSRVLVRPPSQFRNGSFGGFNNFILPY 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00904 304 SMART FANCL_C_2 86 140 - -
Aip02g00904 304 MobiDBLite consensus disorder prediction 244 258 - -
Aip02g00904 304 Pfam Ring finger domain 89 132 IPR001841 -
Aip02g00904 304 SMART ring_2 90 131 IPR001841 -
Aip02g00904 304 MobiDBLite consensus disorder prediction 162 192 - -
Aip02g00904 304 ProSiteProfiles Zinc finger RING-type profile. 90 132 IPR001841 -
Aip02g00904 304 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 14 296 IPR044675 -
Aip02g00904 304 MobiDBLite consensus disorder prediction 239 258 - -
Aip02g00904 304 PANTHER RING-H2 FINGER PROTEIN ATL73-LIKE 14 296 - -
Aip02g00904 304 CDD RING-H2_PA-TM-RING 89 132 - -
Aip02g00904 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 136 IPR013083 -
Aip02g00904 304 SUPERFAMILY RING/U-box 71 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00904 Aip-Chr2 15252597 15253511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00904 19 135 Rapid Response to Elicitors AT3G16720 32.593 1.03e-20 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00904 - - aip:107626991 578.941