Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00903 ATGGGGGTTGCAGAAAACATTGTTGTGGGTTCTCATGTTTGGGTTCCAGATCCGGAATTAGTTTGGATTGATGGACAAGTACTAAGTATCAAGGGAAAGGAAGCTGAGATTCAACTTAGCGATGGGAATAAGGTTGGTTCTAGTTTGTCAAAGTTACACCCCAAGGATGAAGATGCTCCACCTAATGGTGTTGATGACATGACCAAGCTTGCATATTTGCATGAGCCGGGAGTGTTGTATAATCTGAAAAATAGATATGACATCAATGAAATATATACTTATACCGGAAATATTCTTATTGCCATCAATCCCTTCAAAAATATTGAAGATCTGTATGATGTTAACGTCATGAAACGTTACAAGGGAGCGGCAGTTGGAGATTTAAGCCCACATGTTTTTGCTATTGCTGAAGCAGCATATAGAGCAATGATTAATGAGGAGAAGAACAACTCTATTCTGGTTAGTGGTGAGAGTGGTGCTGGTAAGACAGAAACAACCAAAATGATTATGCAGTACCTGGCATTTTTGGGTGGTCATAATGCATCTGAAGGGCGAACTGTTGAAAAACAAGTTCTAGAATCAAACCCAGTTCTTGAAGCATTTGGTAATGCAAAGACAGTAAAAAATTCCAATTCTAGCCGTTTCGGAAAATTTGTTGAGATTCAATTTGATAAGCATGGACGAATATCCGGTGCAGCCATTAGAACTTATCTACTAGAGAGATCACGTGTATGCCAAATCTCGGATCCTGAGCGTAATTATCACTGTTTTTACCTGCTTTGTGCTTCACCTCCTGAGGACAAAGAGAAATATAAGTTGGGAGACCCTAAATCATTTCACTACCTTAATCAATCCAATTGCTATGAATTAGTTGGCATTAATGCAGCTCAAGAGTATCTTAGCACCAAGAGAGCCATGGAAGTTGTGGGAATAAATCAAGAAGAGCAGGAAGCAATCTTCAGAGTTATAGCTGCTATTCTTCATCTTGGAAACATTAACTTCGCAAAATCAGAGGAAGAAACTGATTCATCAGTTCTAGAAAATGAAGAGTCCAAGTTGCATCTCCAAATAACCGCAGAACTTCTCATGTGCGATCCTAGTGCTTTGGAAGATGCACTTTGTAAGCGTGTGATGATTACCCCAGAGGAAGTTATTAAAAGAAGTCTTGATCCTCTTGGTGCAACGGTTAGCAGGGATGGTTTAGCCAAAACACTATATTCTCGTTTATTTGACTGGTTAGTCCAAAAAATCAATGTCTCAATTGGGCAAGACCCAGAGTCAAAATGTCTCATTGGTGTTCTTGACATATATGGCTTTGAAAGCTTTAAGAATAACAGGATGATATCTTCCATGTCAAGTCAAGTTGCCGATTTGAAGATGATTTTAAGTACTTCATCAAGATTGAGTTCAACTTTTCGACCTATTGCTAGAGTTGATGTTGCTTCCAGTAACTCCGATACTTCATCTACAGACTCTGATTTCACATTTCCTGCCTCTGGTCCAAATTCAGATGCTTCCTCTAAGCCAGGCCATTATCCACTTGTTGTTCAGGATGTCACTGGAGAGGATGGGTCAGGATCTGAAAGTGAAAGGGAGGGTTCATTTGATGATTACTTCTAG 1620 0.3957 MGVAENIVVGSHVWVPDPELVWIDGQVLSIKGKEAEIQLSDGNKVGSSLSKLHPKDEDAPPNGVDDMTKLAYLHEPGVLYNLKNRYDINEIYTYTGNILIAINPFKNIEDLYDVNVMKRYKGAAVGDLSPHVFAIAEAAYRAMINEEKNNSILVSGESGAGKTETTKMIMQYLAFLGGHNASEGRTVEKQVLESNPVLEAFGNAKTVKNSNSSRFGKFVEIQFDKHGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCASPPEDKEKYKLGDPKSFHYLNQSNCYELVGINAAQEYLSTKRAMEVVGINQEEQEAIFRVIAAILHLGNINFAKSEEETDSSVLENEESKLHLQITAELLMCDPSALEDALCKRVMITPEEVIKRSLDPLGATVSRDGLAKTLYSRLFDWLVQKINVSIGQDPESKCLIGVLDIYGFESFKNNRMISSMSSQVADLKMILSTSSRLSSTFRPIARVDVASSNSDTSSTDSDFTFPASGPNSDASSKPGHYPLVVQDVTGEDGSGSESEREGSFDDYF 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00903 539 Pfam Myosin N-terminal SH3-like domain 10 45 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aip02g00903 539 PANTHER MYOSIN 6 445 - -
Aip02g00903 539 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 6 445 - -
Aip02g00903 539 MobiDBLite consensus disorder prediction 524 539 - -
Aip02g00903 539 Gene3D Myosin VI head, motor domain, U50 subdomain 312 423 - -
Aip02g00903 539 Gene3D - 252 310 - -
Aip02g00903 539 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip02g00903 539 PRINTS Myosin heavy chain signature 430 458 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip02g00903 539 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip02g00903 539 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip02g00903 539 MobiDBLite consensus disorder prediction 482 506 - -
Aip02g00903 539 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 446 IPR027417 -
Aip02g00903 539 SMART MYSc_2a 56 537 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip02g00903 539 Gene3D Kinesin motor domain 65 439 IPR036961 -
Aip02g00903 539 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aip02g00903 539 MobiDBLite consensus disorder prediction 482 539 - -
Aip02g00903 539 Pfam Myosin head (motor domain) 64 445 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip02g00903 539 ProSiteProfiles Myosin motor domain profile. 62 449 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00903 Aip-Chr2 15231183 15237690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00903 1 445 Myosins gene family AT1G08730 74.831 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00903 K10357 - gmx:100803485 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00903 02 15231183 15237690 Aip02g00903 02 15231183 15237690 ECH