Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00867 ATGGCTGAGAGTGGATATGAAATGTTGGATGAAGAAGCCGGTGACTATAGAGATGTATTGCAGTTGAGTAAGGAAGAGATAATGAATAAGGCATTCCGAAGCGATGAAGCAGCATATGAATTTTACAGGAGGTTAGGCAAATGTTTTGGTTTTGGTATTCGAAAAGGTGACTCGGGAAAAGATGAAAGTGGAAGGGTTATTCGTCGTAGATTTTTTTGTAATAGAGCGGGTCTGAGACAACGTCATCACTATGACAGGCTAGATAGGCAGAGAGGTTATAGACCAGAAACGCGGAAAAATTGTGAGGCAAAGCTATCAGTCTACCTTGATGTGGCAGATGGTGGCAGTAGAGTTGATTACCAATACTTTGGGGATGTTCTAGCCTTTGATTCGACCTACAAGAAAAATAAATATCAGAGACCGCTGGTGATATTTTCTGGTGTGAATAACCATAAGCAGACGACAATATTTGGGTTTGGCTTGGTGTTAGATGAAAGCGTTGGGTCTTATAAGTGGTTGCGGGAAAATTTGTTGGAAGTCATGTGTAACAAGAAGCCGTCGGTTGTCGTCACGGATGGCTGTGATTCAATGAAAGCTGCAATCAAGTCTGTTTTTCCGGAGGCAACGCATCGATTGTGTGCTTGGTATATGGAGAAGAACGTAACCGCTAATGTGAAGGAAGAGGGGCTGCGGCAATGTTTCACCCGGTGGCTGTATTCAGAGATGGAAATAGATGAATTTGAGGCTGAGTGGGATGATGTCGTTGCAGAGTATGGGTTGCAAAATAGTTTTTGGGCCAAAGAAACTTTTCAGAAGAGGATGATGTGGGCTAATGCGTATCTACAAGACAAGTTCTGTGCAGGTTTTCGGACAACATCCCGGTGCGAAGGCATTAACGCGTACGTGAAGAATTTTCTTAAGTCTAGGCACAGTCTCGTTGATATGGTTCAAAATTTGGAGTTGGTCGTGCGAGAGTACCAAAATAATGAATTGCTTGCACAATTTAGATCACTCCATGGGATGTCGGTTATGACAACTTGTTTGGATCCTCTTGAAAAGTATGCTGCAGATGCATACACACAGGAGATATTCGTTGATGCGAAGAAGGAAATAGTGGGTGTCGGTGCAGTTAATTTTGTTGCCAAGATTAGTCGTTCAACTACAATGGTGTACACATTGGAGGAATACGGCGACCCAAGTAGAGAGGTGATTGTGTTGTACGATAGGGTTTCAAGGAAAATGGAGTGCCGATGCAATTTTTGGAGCCAAAAGGGAATACCTTGTCAGCATATATTTTTTGTAATGAAGCATAAGCATTTGACTCGAATTCCTGAGAGGCTGGTTCTGAAGAGGTGGCGCAAGGATACAAAGTCGTTGGATAAGTATGCTGAGATAACGGAAGTTGGTAGTGAAATTGGTTTCTTGTTGCGCCATGGTGCACTTCATGCAGCCGCACAGTGGATGCTATATGTCGGAGCTAGGAGCCCTTCGTCTTTCACACAGGCGCTTAACGGTCTCCATACGCTGTGTCAGGAACTGGATAGAGGCCCTGAAAATGTCCGTCAGAAGAAAGCTCTTAATACGGTTGATTTACATGACCCTGTTGTGGCGAAGACCAAGGGTGCCCCTCGTGTGAGGAGGCAGGATAGACGGAAAAGGCGCTGCACCCGTTGCCGCAAAACGGGGCACACAAAACGACACTGCAATGCCGACCAGTCCTTTGTTTCCAAAGTTGAAGAGAGCAAAGATTTTGAGGCGACAAATTTAGGGTCGGAGGGGTCATTGCCAACGGAAGGGGTCAGATTCGAACACGGCAAGAAGGGTGTTCTTGGACCCAATAATTTGGCTACACAGGTTTGCTTAGAGGCATCAGGTTTGAAGATTAGATTACAACATGAAATTCCTGTTGCAACTGGATGTAATGAGACTATGGAATGGGAGAGGAACATGATAAGTAACACCGATGATTTACTAGCACAGTTCAAGACTGGGTTCGAGGTTTCTAGCATAATTAGTAGTCAAAGTTGGTGTTCATTAGAGAATTCAGTTTCCTAA 2055 0.4423 MAESGYEMLDEEAGDYRDVLQLSKEEIMNKAFRSDEAAYEFYRRLGKCFGFGIRKGDSGKDESGRVIRRRFFCNRAGLRQRHHYDRLDRQRGYRPETRKNCEAKLSVYLDVADGGSRVDYQYFGDVLAFDSTYKKNKYQRPLVIFSGVNNHKQTTIFGFGLVLDESVGSYKWLRENLLEVMCNKKPSVVVTDGCDSMKAAIKSVFPEATHRLCAWYMEKNVTANVKEEGLRQCFTRWLYSEMEIDEFEAEWDDVVAEYGLQNSFWAKETFQKRMMWANAYLQDKFCAGFRTTSRCEGINAYVKNFLKSRHSLVDMVQNLELVVREYQNNELLAQFRSLHGMSVMTTCLDPLEKYAADAYTQEIFVDAKKEIVGVGAVNFVAKISRSTTMVYTLEEYGDPSREVIVLYDRVSRKMECRCNFWSQKGIPCQHIFFVMKHKHLTRIPERLVLKRWRKDTKSLDKYAEITEVGSEIGFLLRHGALHAAAQWMLYVGARSPSSFTQALNGLHTLCQELDRGPENVRQKKALNTVDLHDPVVAKTKGAPRVRRQDRRKRRCTRCRKTGHTKRHCNADQSFVSKVEESKDFEATNLGSEGSLPTEGVRFEHGKKGVLGPNNLATQVCLEASGLKIRLQHEIPVATGCNETMEWERNMISNTDDLLAQFKTGFEVSSIISSQSWCSLENSVS 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00867 684 ProSiteProfiles Zinc finger CCHC-type profile. 553 568 IPR001878 GO:0003676|GO:0008270
Aip02g00867 684 ProSiteProfiles Zinc finger SWIM-type profile. 401 439 IPR007527 GO:0008270
Aip02g00867 684 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 113 468 IPR031052 GO:0006355
Aip02g00867 684 Pfam FAR1 DNA-binding domain 40 109 IPR004330 -
Aip02g00867 684 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 30 108 - -
Aip02g00867 684 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 113 468 - -
Aip02g00867 684 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 30 108 IPR031052 GO:0006355
Aip02g00867 684 Pfam MULE transposase domain 126 220 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00867 Aip-Chr2 14048392 14051082 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g00867 MULE 3.2e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00867 - - aip:107626898 1102.81