Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00864 ATGGCTGAGAGTGGATATGAAATGTTGGATGAAGAAGCCGGTGAATATGGAGATGTATTGCAGTTGAGTAAGGAAGAGATAATGAATAAGGCATTCCAAAGCGATGAAGCAGCATATGAATTTTACAGGAGGTTAGGCAAATGTTTTGGTTTTGGTATTCGAAAGGGTGACTCGGGAAAAGATGAAAGTGGAAGGGTTATTCGTCGTAGATTTTTTTGTAATAGAGCGGGCCTGAGACAACGTCATCACTATGATAGGCTAGATAGGCAGAGAGGTCATAGACCGGAAACGCGGACAAATTGTGAGGCAAAGCTATCAGTCTACCTTGATGTGGTCAATGGTATATGGAGGGTGAGGAAAATAGTATTGGATCATAACCATGATTTAACTCCGGCATATATGGTTCATATGATGACGAATTTTAGAGAAATAAGTTGTTCCGCTAAGGCACAAATATCTGGTATACAGGCTCATGGTGTTCCGACGTCTAAGATTCTAGGGTATATGGCTGGATAG 516 0.4128 MAESGYEMLDEEAGEYGDVLQLSKEEIMNKAFQSDEAAYEFYRRLGKCFGFGIRKGDSGKDESGRVIRRRFFCNRAGLRQRHHYDRLDRQRGHRPETRTNCEAKLSVYLDVVNGIWRVRKIVLDHNHDLTPAYMVHMMTNFREISCSAKAQISGIQAHGVPTSKILGYMAG 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00864 171 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 21 149 - -
Aip02g00864 171 Pfam FAR1 DNA-binding domain 40 130 IPR004330 -
Aip02g00864 171 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 21 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00864 Aip-Chr2 14025832 14026347 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g00864 FAR1 8.4e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00864 - - aip:107626899 334.724