Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00862 GTGATGGCAGAGGTGATTGGAACATTTATTTTGATGTTGTGTGTAAGTGGAATAATAGCAAGCACAAAATTCCAAAATGGTGAAGTGGGGCTTCTAGAGTATGCAGCCACAGCAGGATTAACAGTGGTTGTTATCATCTTCTCCATAGGACCAATTTCTTGTGCACATGTCAACCCAGCTGTCACAATTGCCTTTGCCACAATTGGTCATGTTCCATGGTACAAGGTTCCAATTTACATAATAGCACAGATAGTAGGTTCTATATTTGCCACATTTATAGGTAGCCTTGTTTATGGCATAAAATCAGAGGTTATGATCACAAGGCCAATCCAAGGTTGCAACTCTGCATTGTGGGTTGAACTCATTGCAACTTTCATCGTCATGTTCCTTGTTGCAGCTTTGACATCTGAGCATGAATCAGTTGGGCATTTATCTGGCTTTGTTGCTGGAATTGCAATTGGTCTTGCTGTACTAATCACAGGGTAA 486 0.4095 VMAEVIGTFILMLCVSGIIASTKFQNGEVGLLEYAATAGLTVVVIIFSIGPISCAHVNPAVTIAFATIGHVPWYKVPIYIIAQIVGSIFATFIGSLVYGIKSEVMITRPIQGCNSALWVELIATFIVMFLVAALTSEHESVGHLSGFVAGIAIGLAVLITG 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00862 161 PRINTS Major intrinsic protein family signature 119 137 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip02g00862 161 PRINTS Major intrinsic protein family signature 150 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip02g00862 161 PRINTS Major intrinsic protein family signature 75 94 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip02g00862 161 PRINTS Major intrinsic protein family signature 38 62 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip02g00862 161 Pfam Major intrinsic protein 1 159 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip02g00862 161 ProSitePatterns MIP family signature. 56 64 IPR022357 -
Aip02g00862 161 SUPERFAMILY Aquaporin-like 2 160 IPR023271 -
Aip02g00862 161 PANTHER AQUAPORIN NIP7-1-RELATED 1 161 - -
Aip02g00862 161 PANTHER AQUAPORIN NIP2-1 1 161 IPR034294 -
Aip02g00862 161 Gene3D Glycerol uptake facilitator protein. 1 161 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00862 Aip-Chr2 13947578 13949433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00862 3 161 Major Intrinsic Protein MIP AT1G80760 39.623 1.09e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00862 K09874 - mtr:MTR_1g070385 283.108