Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00849 ATGGAGAAGATGGTGTTTGAGGAAACTGAGCTCAGGCTTGGGCTGCCAGGGAACAACAAGAAGAAGAACAATGAAAAGAAGAGAGGGTTCTCTGAGACCGAATCTGAAACTGAGAGTGATGAGAACAATAATAGTGATGAAACTTCCAACACTACCGTGGATTTGTTGCTGAATCTCTCATCACCAAAGAAGGAAGCAAATAAGAATAACAACAATAATGGTGTTGTTGCTGAGAACCACTCATCTCCTAATAATAATAAGGAGAAGAATCTTCTTCCTTCTGATCCTGCCAAGCCTCCTGCTAAGGCTCAAGTGGTGGGATGGCCACCAGTGAGGTCATACAGGAAGAACATGTTTGCAGTTCAAAAAAGCAGCACAGAAGAGAGTCAGAAGAATGAGAAGAATAACAATAATGGAAATGGTAATGGAAGCTTTGTGAAGGTAAGCATGGATGGTGCACCCTACCTTCGCAAAGTGGACTTGAAGAACTACAACAGTTACCCTCAGCTCTCTGATGCCTTAGGCAAAATGTTTAGCTCTTTCACTATTGGAAGTTGTGAATCAGAAGGAATGAAGGATTTCTTCATGAATGAGAGAGCTTTGATGGATTTATTGAACAATTCTGATTATGTCCCAACTTATGAAGATAAGGATGGAGATTGGATGCTTGTCGGTGATGTTCCTTGGGAGATGTTTGTGGAATCATGCAAGCGTTTACGTATCATGAAAGGAAAAGAAGCAATTGGACTGGCACCTAGAGCCATGGAGAAATGCAAGAACAGAAGCTAG 789 0.417 MEKMVFEETELRLGLPGNNKKKNNEKKRGFSETESETESDENNNSDETSNTTVDLLLNLSSPKKEANKNNNNNGVVAENHSSPNNNKEKNLLPSDPAKPPAKAQVVGWPPVRSYRKNMFAVQKSSTEESQKNEKNNNNGNGNGSFVKVSMDGAPYLRKVDLKNYNSYPQLSDALGKMFSSFTIGSCESEGMKDFFMNERALMDLLNNSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00849 262 Gene3D - 137 256 - -
Aip02g00849 262 SUPERFAMILY CAD & PB1 domains 135 243 - -
Aip02g00849 262 MobiDBLite consensus disorder prediction 44 91 - -
Aip02g00849 262 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 3 255 IPR003311 GO:0005634|GO:0006355
Aip02g00849 262 MobiDBLite consensus disorder prediction 118 144 - -
Aip02g00849 262 PANTHER AUXIN-INDUCED PROTEIN AUX28 3 255 - -
Aip02g00849 262 MobiDBLite consensus disorder prediction 1 144 - -
Aip02g00849 262 MobiDBLite consensus disorder prediction 19 35 - -
Aip02g00849 262 Pfam AUX/IAA family 8 253 IPR033389 -
Aip02g00849 262 ProSiteProfiles PB1 domain profile. 143 244 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00849 Aip-Chr2 13697315 13703969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00849 114 242 B3 DNA Binding Superfamily AT5G37020 28.682 2.23e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Aip02g00849 AUX_IAA 1.9e-89 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00849 K14484 - gmx:100803065 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00157 06 1600889 1602350 Aip02g00849 02 13697315 13703969 PCT