Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00846 ATGGCCAATCGCCATCCTTCCGAGGCTCCCGCCGCCGACGACTTCCTCGAGCAAATCCTCGGCCTCCCGAACTTCGCCTCCGCCGACTCCACCCTCGCCGGAGGAACCGGCGCCTCCTCTCTCGCCGCCGCCGCAGCTGCAGCTGCTGCTTCTCCAGCGGCGCCGATGATGCTTCAGCTAAGCTCTGACGACGCCTCCGCCGCGTACCTCGTCGGCGCCACCGCAGGTGGTGGTTTCCACCCGTCGCCGGTGTACGAGCTTGGGCTGAGCCTGGAGCAAGGGAATGGAGGAGGGTTCTTGAAGCCTGAGGATGCTTCTGGAAGTGGAAAACGGTTTCGTGACGACGTTGTTGATGGAAGAGTTAAGAATGTTTTCCATGGGCAGCCCATGCCTACAACTGTTCCCGCTGCTCCACATCCACCAGGAATGCGCCCTCGGGTGCGGGCTCGTAGAGGTCAGGCTACAGATCCACACAGCATAGCTGAAAGGCTGCGCAGAGAAAGAATAGCTGAAAGGATCAGGGCCTTGCAAGAACTGGTTCCCAGTGTTAACAAGACAGATAGAGCTGCTATGCTCGATGAAATTGTGGATTACGTCAAGTTCTTAAGGCTTCAAGTGAAGGTTTTGAGCATGAGTAGGCTGGGCGGTGCCGGTGCAGTGGCTCCATTAGTAACCGACATCCCATTATCATCAGTCGAGGAAGAAGGCGGCGAGGGAAGAAACCAACCAGCTTGGGAGAAGTGGTCGAATGATGGCACAGAAAGGCAAGTAGCTAAGCTAATGGAAGAAAATGTTGGCACCGCCATGCAGTTCCTTCAATCAAAAGCACTCTGCATCATGCCAATCTCACTAGCTTCAGCGATATACCAGTCACAACCACCAGACACCTCTAGCATAGTAAAGCCAGAAACTAACCCTCCTTCATAG 927 0.5556 MANRHPSEAPAADDFLEQILGLPNFASADSTLAGGTGASSLAAAAAAAAASPAAPMMLQLSSDDASAAYLVGATAGGGFHPSPVYELGLSLEQGNGGGFLKPEDASGSGKRFRDDVVDGRVKNVFHGQPMPTTVPAAPHPPGMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGGEGRNQPAWEKWSNDGTERQVAKLMEENVGTAMQFLQSKALCIMPISLASAIYQSQPPDTSSIVKPETNPPS 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00846 308 Gene3D - 148 210 IPR036638 GO:0046983
Aip02g00846 308 Pfam Helix-loop-helix DNA-binding domain 158 202 IPR011598 GO:0046983
Aip02g00846 308 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 8 297 - -
Aip02g00846 308 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 153 202 IPR011598 GO:0046983
Aip02g00846 308 MobiDBLite consensus disorder prediction 126 157 - -
Aip02g00846 308 SMART finulus 159 208 IPR011598 GO:0046983
Aip02g00846 308 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 8 297 - -
Aip02g00846 308 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 151 212 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00846 Aip-Chr2 13636117 13640669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00846 79 307 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 80.508 4.72e-120 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aip02g00846 HLH 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00846 - - gmx:100797789 446.817