Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00804 ATGTCTCTAACTGCCGATAAGGATGAGCTCTACAAGGAGTTTCTTAAAGCCTTACGAGGTGGGTTAGTATTAGTTGAGAAAGATTTTAAAGCCATTAAAGAAGCATTAGAGGAAGCATTTGCCAAAGCTGACACCAAGTTGTTGAAATGGCTTGAAATGAATAAAGAGGAGGACGAATCAGGCGCAACAGCAACTGCAATCTTCATAGGGGATGATACACTGCTCGTTTTGCACATTGGTGACTCATCTATGgacaaaaacccgccccactgccacccctaccaccacctagCCCGCCGCCTCGTTCAGATTGGTGTCACCGACATCTTCTCTGTCCCCGGTGGCTTTAACCTCACTCTCCTCGACCACCTCATAGCCGAGCCAGGCCTCAACCTTATTGGTTGTTGTAACAAGCTCAATGCAGGGTACGTCGCAGACAACTACGCGCAATTACGTGGAGTTGGCATGTGCATTGTTACGTTCACTGTTTGA 492 0.4268 MSLTADKDELYKEFLKALRGGLVLVEKDFKAIKEALEEAFAKADTKLLKWLEMNKEEDESGATATAIFIGDDTLLVLHIGDSSMDKNPPHCHPYHHLARRLVQIGVTDIFSVPGGFNLTLLDHLIAEPGLNLIGCCNKLNAGYVADNYAQLRGVGMCIVTFTV 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00804 163 Gene3D - 94 163 - -
Aip02g00804 163 PANTHER PYRUVATE DECARBOXYLASE 93 163 IPR012110 GO:0016831
Aip02g00804 163 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 95 161 IPR012001 GO:0030976
Aip02g00804 163 Pfam Protein phosphatase 2C 30 83 IPR001932 -
Aip02g00804 163 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 94 161 IPR029061 -
Aip02g00804 163 Gene3D - 5 84 IPR036457 -
Aip02g00804 163 SUPERFAMILY PP2C-like 8 83 IPR036457 -
Aip02g00804 163 PANTHER PYRUVATE DECARBOXYLASE 1 93 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00804 Aip-Chr2 12788839 12790732 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00804 7 82 PP2C-type Phosphatase Gene Family AT4G27800 55.844 5.52e-19 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00804 K01568 - pvy:116115141 127.872