Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00799 atgcatgccgccggactgctcccaccgccatcgcaagttggagcttcgaagccaccgttgccatcgtgcagctaccgtttcagctttggaagcaccgtcgccgggctcgcctcctgcctccgtcgcgCAGATCTGTTCCACCGGCCCTTTATTTCTCTAGTAACATCAAAAGTAATCCGTGTCTCAGCAATGGCGGCACCATTTTTCTCAACACCTTTTCAGCCCTATGTTTATCAGAGTCCGCAAGATGCAATCACACCTTTTCAGATTTTAGGGGGTGAAGCTCAGGTGGTCCAGATAATGTTGAAGCCCCAAGAAAAAATTATTGCAAAGCCTGGTTCCATGTGCTTTATGTCAGGATCCATTGAAATGGAAAATTCCTATCTTCCAGAAAATGAAGTAGGCATATGGCAGTGGCTATTTGGCAAAAACATAAGTAGCATCGTTCTTCGTAATTCTGGACAAAGTGATGGATTCGTTGGAATTGCTGCACCTTATTTTGCAAGAATTCTTCCGATTGATTTAGCAAGCTTTAACGGGGAGATTTTGTGTCAGCCAGATGCATTTCTTTGCTCTGTCAATGATGTGAAAGTCAACAACACAATTGATCAGAGGGGACGTAATCTTATTGCTGGTGCTGAGAGGCTTTTCATCGCGCCTCCAACCCTGACCCCAAAGCCTTTTCATCGCACCTCCAACCCTAACGCTAGAGCTTCATCGTGCTTCCAACCCCTCCTTCGGCGCTCCCTCCGTCAGTGCTCTCTCTGTCTCAAATGCTCCTTGAGTGATAATGACGACGACGATGGATTGAACATTGTCTTAAATGATGATGAAGGTGTATGCAACGGTCTTCCACCTATTGCGCGTTGTGATGACGTGGATGATGATTGCGGTGGTGAAGGTGGCGGCGATGGTGATGGTGGTTTGCGATTGGAGGATAGTCAAGTTGATGTGTCTGGGGGTCGAAAGGCTGTTGTTATCCATGTTCCCTTCAGATTAAGGAAAGATTTCCGGAAGATTCATGTTAGACTTGTTAGAGAGCTTGAGAAGAAGTTCAGTGGCAAGCATGGAACAGTTCTAGATTTCTGGTCATCTAATGTTAAGAAGCTGTATTTATGCTGA 1122 0.3948 MHAAGLLPPPSQVGASKPPLPSCSYRFSFGSTVAGLASCLRRADLFHRPFISLVTSKVIRVSAMAAPFFSTPFQPYVYQSPQDAITPFQILGGEAQVVQIMLKPQEKIIAKPGSMCFMSGSIEMENSYLPENEVGIWQWLFGKNISSIVLRNSGQSDGFVGIAAPYFARILPIDLASFNGEILCQPDAFLCSVNDVKVNNTIDQRGRNLIAGAERLFIAPPTLTPKPFHRTSNPNARASSCFQPLLRRSLRQCSLCLKCSLSDNDDDDGLNIVLNDDEGVCNGLPPIARCDDVDDDCGGEGGGDGDGGLRLEDSQVDVSGGRKAVVIHVPFRLRKDFRKIHVRLVRELEKKFSGKHGTVLDFWSSNVKKLYLC 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00799 373 Pfam Ribosomal protein S7e 315 356 IPR000554 GO:0003735|GO:0005840|GO:0006412
Aip02g00799 373 ProSitePatterns Ribosomal protein S7e signature. 343 356 IPR000554 GO:0003735|GO:0005840|GO:0006412
Aip02g00799 373 Pfam Mitochondrial biogenesis AIM24 88 217 IPR002838 -
Aip02g00799 373 PANTHER TRYPTOPHAN RNA-BINDING ATTENUATOR PROTEIN-LIKE PROTEIN 64 214 - -
Aip02g00799 373 PANTHER TRYPTOPHAN RNA-BINDING ATTENUATOR PROTEIN-LIKE PROTEIN 64 214 - -
Aip02g00799 373 SUPERFAMILY TRAP-like 87 218 IPR016031 -
Aip02g00799 373 Gene3D Mitochondrial biogenesis AIM24 83 234 IPR036983 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00799 Aip-Chr2 12581874 12594146 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00799 315 355 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 82.927 4.91e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00799 - - adu:107482982 311.227