Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00765 ATGAGAGAGGGTTTAAGATCTCAGACTCGATTGGGGAATGTTTGTGCTGGCGGGGGTGATGGTGTAAAGAGTGTTCCTTTCGATTTAGGTGGTGAAGGTTCGCAGGTTGGTGGGGAGGTGTTAGGGTCAGTGGTTGCGGAGAAGGAGGATAATGTCGTTGAAAGAGATGCGAAGGAAGAATGTGATGCTGATTTGGGTGCTAGTACTAGTGGGAAAGGGGATGCTGAATCAGTTGAGGGTGGGGGCAATGAGGGCTGTGAAGATGGTGGTGTTGAAAGGATGGTAGAGAGTGAGAGAGAAGAGTTGACAGAGTCTGTAACTATAGGTGGTCGAGTGTTGCGTTCCAGGACAAAGAGGCCAGAAAATGAAAAACCTTGCAGTGGAGGGAATAGTGGTGGTGTAGTTGTTTCAGGGAGAGGCGGGGGACATGGTGGTCTTAGGAGGGTAACAGTCAAGAAGGATAGTGAAGATGATGATGATTTTGTTCCTAATGGTTGTGCGAATAAGGGGGTTGGGCTGGAGAAGAAACGGAAGCGTGGGAGGCCTCGGAAAGTAAAGTTGGAAGAATCAGACGAGTTAGGTATGGTGAGTTGTGGGAATGAGAAGGTTGAGCTGAAGAAGGATGTGAATGGCAGAAAGAAGAAGCGGAAGCGCGGGAGGCCTCCTAAAGTGAAGGTGGAAGATCCGGATAAGCTAGTTGAGCAGTCTCCAAGGAAGAGGGGTAGACCCCCCAAGGTTCATGGACAAAACCATCTCCCAATAATGGTGCATGATAGAAAAGTCAATGTGCGCCGTCGAAAAGGTAAAAAAGGTTTAACTGCAACGGTTGGTGCCAAAGCAAATGGGATTGCTTATTGGAGCTCAAGGAGATCTTCTCAGAAAGAGCTAGAAACGAAGGGAATTTCTCCTGTGAAGGATGATAAATTAGGGAAGTTTTTGGAAACTGAGAGCAATGGGGTTTGTGAGGGAATAAGCGGAGAAATAATGGAAGGAAGAAAGCAAGAACTAGGAAAGGATGGAAGGAAGAAAAAAATGCGGAAGGAAGGAAGGAAGGAAGAAAAGCAGTTAGTCAGGGAAAAGATTATGGAGCAGATTTTAGCTGCTGGCTGGACAGTTGATTATAGACCTAGGAATGGAAGGGAATACAAGGATGCCGTGTATGTTAGTCTAGATGGTAAGACACACTGGTCTATCACCTTGGCTTACAATAGGCTTAAACAACATTACGAAGCTGCTGATGGTGAAGGAACGGTATATGGGCCAGGTTTTGAATTTACACCAATACCTGAAGCGGATTTCCAAATGCTGACCAAGGTAATGAAAAAGCAAAGAGGAAGTAAAAATAAAAAGATGCAAAATGGGGTGAAGGGTAAAAAGTGGAAGAAAGGAAAAGCAGGTTCGCATGCAGGCATGGGTAAATCTGCGAAGCGGAAAATGAAAAGGAAATGGACAGAGGACGATGACACAGATGTTATGTTGCCTAATAAAGTGTCAGGTCTGGTCAGGGATCATAAGAGACATAAAACACAAAGCAAGAAGCGAGGTGCTCCATTGGTTCGCAATGCTGAGGTTGATATAGATTCAGAAGTTAATGGATATGTACCATACTGCGGAAAACGAACTGTACTTGCATGGATGATAGATTTGGGAACAATTCTGCAAGATGGGAAGGTTCATTATATGCAACTTGGAGAGAACAATGTGTTATTGGACGGTAAGATCACAGGAGATGGCATTCATTGCGGCTGCTGTAATGAAGTCATAACGATTTCAGATTTTGAAGCTCATGCAGGAATCAAACACTCTGATCCACTTAAAAATATACACATAGAGGGAGGAACTTCCCTCTTGCAATGCCTACTAGATTCATGGAATAAACAGGATGAGTGTGAACGTAAAGGTTTTCATTTTGTTGATGTTGCTGGCGAGGATCCAAATGATGACACATGTGGTGTCTGTGGAGATGGGGGAGACTTGATCTGCTGTGATGGTTGCCCATCAACCTTCCACCAGAGTTGCTTGGATATAAACAAGTTCCCATCCGGTGACTGGCACTGTGTATATTGTTGTTGCAAATTTTGCGGGTCGGTTGGTGGTAGTTCAAATCAGACAGATGAAAAAGATGGTTCTGCTATGTCAACCTTACTCACATGCCGTTTATGTGAAGCAAAATACCACAGAGACTGTGCAGAAGAAAATGGTGCCAAGCCTGATGATTCCAGAGATGCCTCCTTTTGTGGAAACAGATGCCAAGAGTTATCAGAGAGGCTTGAAATGCTTCTTGGGGTTAAGCGTGAAATTGAAGATGGATTTTCTTTGACTTTAATTCGGAGATCAGATGTTGCCCTTGATGTTTCTCAGACAAAACCTGAGATAATTGAACGTAATTCCAAGCTGGCTGTTGCATTATCGGTAATGGATGAGTGCTTCATGCCATACATTGATGAGAGAAGCGGGATTAATCTGATCCATGGCATTCTATATAATTGTGGGTCAAACTTCAAACGTCTGAACTATAGTGGATTCATTACTGCAATTCTCGAGCGAGGGGATGAAATCGTTGCTACTGCAACTATCAGGATTCATGGAAATCAACTAGCAGAGATGCCATTTATTGGGACCCGTTTTATGTATAGGCGACAAGGGATGTGCCGCCGGCTTCTAAATGGCATTGAATGTGCACTTAGCTCTTTAAATGTTGAATTATTGGTCATACCAGCTATCTCAGAAATGAGAGAAACTTGGACTTCTGTTTTTGGGTTTGAGCCGCTTGAATTGGAAAACAAGAAAATAATAAAGAGCATGAGTCTGTTGATATTCCCTCATGTAGATATGCTGCAGAAGAAGATGTTGAAGCATAAGTTTGCTGAGGAAACTGTGATTACTGCAGAAGCTTCCAATCTTCTGAAAGATCATACAGAAGGCGAGGTGGCAAATAATTGTGAAGGGGCAGAATCATTTGGATCTCAGTCAATGAACAATTCTGCCGACATCCCTTGTTCTAATGATGACCAGATGATGGATAAAACCATGCCTACTGAATCTGGCAGTCTTCTTCCTGAGGGTTCATTGAATAACTTACCCAACAATAATGGCAACACTAAACTTCATGATAAATGTCCAGAAGATATCACATGCCAAGTTGTTTGCCATGAAAATTTGCCAGTGGAAGACATAAGCACTGCAAATCCCCCTGATGATGGAACTGAAGACGCCGGTACACGTAAGAATACTAGTCTTGATTGCGTCGAGCTGAACGATGATGAGAAGCAAGTAGATTTAGATGGTCAATCAAACAACTGCTGCAATACTTATGAGGAAACAGAATGTCTTAGAGATGGTTGTCACTCTGGTGAAGCAGTTCCTACAACCAATGACTCGGTGCACCTTCAGTCAAAGGACATCACTGAAGATTGTCCCGATAATTGCGAAACAAACTCCAAAGTGGTAACCACACCAGGCTCTGATGAAGCCGAAGTACACCCAACTGAACCACCTAAGCACCAGACAGATACAGAAGATTGCCAATCCTTTCCTGTATCTTCTGATTTATGTGAGAAGTTTGTGGATTGTGTTGATGATAATAGTAAGCCATCCACAGATGTTAAGGCCGATTCCTTTCCCGCTGATACAGACAGAAATCCAAACGACGAACATCTGACAAAGGGATCACCAGGGCTACCGGAGCACGACTTGCAGGTCGATCAAAATCCGCAGGGCAATGCTCCGACCCTGTGTACTCCAAACACTGCTTCTAGCGTAGCTCTTAACTGTGCTTCTGTGGGTGCTGGCAGTACTTCTTGCAGTAGTACTGAGGTGATAGTTCTGTCAAACCAAGCCAGTTGA 3846 0.4384 MREGLRSQTRLGNVCAGGGDGVKSVPFDLGGEGSQVGGEVLGSVVAEKEDNVVERDAKEECDADLGASTSGKGDAESVEGGGNEGCEDGGVERMVESEREELTESVTIGGRVLRSRTKRPENEKPCSGGNSGGVVVSGRGGGHGGLRRVTVKKDSEDDDDFVPNGCANKGVGLEKKRKRGRPRKVKLEESDELGMVSCGNEKVELKKDVNGRKKKRKRGRPPKVKVEDPDKLVEQSPRKRGRPPKVHGQNHLPIMVHDRKVNVRRRKGKKGLTATVGAKANGIAYWSSRRSSQKELETKGISPVKDDKLGKFLETESNGVCEGISGEIMEGRKQELGKDGRKKKMRKEGRKEEKQLVREKIMEQILAAGWTVDYRPRNGREYKDAVYVSLDGKTHWSITLAYNRLKQHYEAADGEGTVYGPGFEFTPIPEADFQMLTKVMKKQRGSKNKKMQNGVKGKKWKKGKAGSHAGMGKSAKRKMKRKWTEDDDTDVMLPNKVSGLVRDHKRHKTQSKKRGAPLVRNAEVDIDSEVNGYVPYCGKRTVLAWMIDLGTILQDGKVHYMQLGENNVLLDGKITGDGIHCGCCNEVITISDFEAHAGIKHSDPLKNIHIEGGTSLLQCLLDSWNKQDECERKGFHFVDVAGEDPNDDTCGVCGDGGDLICCDGCPSTFHQSCLDINKFPSGDWHCVYCCCKFCGSVGGSSNQTDEKDGSAMSTLLTCRLCEAKYHRDCAEENGAKPDDSRDASFCGNRCQELSERLEMLLGVKREIEDGFSLTLIRRSDVALDVSQTKPEIIERNSKLAVALSVMDECFMPYIDERSGINLIHGILYNCGSNFKRLNYSGFITAILERGDEIVATATIRIHGNQLAEMPFIGTRFMYRRQGMCRRLLNGIECALSSLNVELLVIPAISEMRETWTSVFGFEPLELENKKIIKSMSLLIFPHVDMLQKKMLKHKFAEETVITAEASNLLKDHTEGEVANNCEGAESFGSQSMNNSADIPCSNDDQMMDKTMPTESGSLLPEGSLNNLPNNNGNTKLHDKCPEDITCQVVCHENLPVEDISTANPPDDGTEDAGTRKNTSLDCVELNDDEKQVDLDGQSNNCCNTYEETECLRDGCHSGEAVPTTNDSVHLQSKDITEDCPDNCETNSKVVTTPGSDEAEVHPTEPPKHQTDTEDCQSFPVSSDLCEKFVDCVDDNSKPSTDVKADSFPADTDRNPNDEHLTKGSPGLPEHDLQVDQNPQGNAPTLCTPNTASSVALNCASVGAGSTSCSSTEVIVLSNQAS 1281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00765 1281 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 790 950 IPR000182 GO:0016407
Aip02g00765 1281 ProSiteProfiles Zinc finger PHD-type profile. 647 692 IPR019787 -
Aip02g00765 1281 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 48 1156 - -
Aip02g00765 1281 MobiDBLite consensus disorder prediction 222 241 - -
Aip02g00765 1281 Pfam Tify domain binding domain 572 621 IPR032308 -
Aip02g00765 1281 PANTHER PHD FINGER PROTEIN 12 48 1156 IPR042163 GO:0003714|GO:0045892
Aip02g00765 1281 MobiDBLite consensus disorder prediction 442 485 - -
Aip02g00765 1281 MobiDBLite consensus disorder prediction 1234 1248 - -
Aip02g00765 1281 MobiDBLite consensus disorder prediction 333 353 - -
Aip02g00765 1281 MobiDBLite consensus disorder prediction 1197 1225 - -
Aip02g00765 1281 MobiDBLite consensus disorder prediction 442 478 - -
Aip02g00765 1281 MobiDBLite consensus disorder prediction 147 163 - -
Aip02g00765 1281 MobiDBLite consensus disorder prediction 1124 1176 - -
Aip02g00765 1281 MobiDBLite consensus disorder prediction 1197 1248 - -
Aip02g00765 1281 SMART PHD_3 691 751 IPR001965 -
Aip02g00765 1281 SMART PHD_3 649 690 IPR001965 -
Aip02g00765 1281 SUPERFAMILY FYVE/PHD zinc finger 642 694 IPR011011 -
Aip02g00765 1281 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 639 713 IPR013083 -
Aip02g00765 1281 Pfam AT hook motif 176 186 IPR017956 GO:0003677
Aip02g00765 1281 Pfam AT hook motif 215 226 IPR017956 GO:0003677
Aip02g00765 1281 Pfam AT hook motif 237 247 IPR017956 GO:0003677
Aip02g00765 1281 SMART AT_hook_2 215 227 IPR017956 GO:0003677
Aip02g00765 1281 SMART AT_hook_2 237 249 IPR017956 GO:0003677
Aip02g00765 1281 SMART AT_hook_2 176 188 IPR017956 GO:0003677
Aip02g00765 1281 MobiDBLite consensus disorder prediction 1057 1076 - -
Aip02g00765 1281 PRINTS AT-hook-like domain signature 176 186 IPR017956 GO:0003677
Aip02g00765 1281 PRINTS AT-hook-like domain signature 213 224 IPR017956 GO:0003677
Aip02g00765 1281 PRINTS AT-hook-like domain signature 235 245 IPR017956 GO:0003677
Aip02g00765 1281 MobiDBLite consensus disorder prediction 54 250 - -
Aip02g00765 1281 MobiDBLite consensus disorder prediction 89 105 - -
Aip02g00765 1281 CDD PHD1_AIRE 650 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00765 Aip-Chr2 12007448 12014677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00765 173 969 PHD Transcription Factor Family AT5G36670 40.936 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00765 - - lang:109346644 1206.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00765 02 12007448 12014677 Aip02g00765 02 12007448 12014677 ECH
Aip06g00197 06 2015444 2023530 Aip02g00765 02 12007448 12014677 PCT