Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00754 atggaagaaagggagcattccaacccatggcatccgacggagCTCGGCCACAAGTCCGACGGCCAGACCATCGAGTGGCTCCTCTGCCAGGCCGAGCCCTCAATCATCGCCGCCACCGGAACCGGAACCACTCCCGCCAGCTTCTCCTCCGTTTCCGTCTCCATACGTGGCAGTGCTGGCTCTCTCTCTTCTCCTTCCTCAACCTCCGCATCGTCTTCGCTCGACCACAAGCCCTTGCTCGCTCCCACTCCCTTCATACTCGGCAAGTGCATATGCACTGACGACGACGCTTCTGCCAAGGACGACGACGTCTCCGTGGGTCCCGCCGTGGGGTCCTTAGTGATTGCTATTTCAGATAAAGTTGAGATTTTTTCTATGTGCTGCTTCTAA 390 0.5179 MEEREHSNPWHPTELGHKSDGQTIEWLLCQAEPSIIAATGTGTTPASFSSVSVSIRGSAGSLSSPSSTSASSSLDHKPLLAPTPFILGKCICTDDDASAKDDDVSVGPAVGSLVIAISDKVEIFSMCCF 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00754 129 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 14 111 - -
Aip02g00754 129 Pfam TCP family transcription factor 14 71 IPR017887 -
Aip02g00754 129 ProSiteProfiles TCP domain profile. 1 38 IPR017887 -
Aip02g00754 129 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 14 111 IPR005333 GO:0003700
Aip02g00754 129 MobiDBLite consensus disorder prediction 56 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00754 Aip-Chr2 11847788 11848177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00754 14 107 TCP Transcription Factor Family AT5G23280 63.918 1.18e-30 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip02g00754 TCP 5.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00754 K16221 - aip:110269354 158.688