Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00697 GAGTTGTTAATACTCAGTATTACCGAACTGTTGGAGACAAAATTCTTCCATTCAGTAAAATTGTTGTCAATTTTTTCGGACATGACAACTTCTCTACAATTCAGTCTGCCATTGATTCTGTCCCTTCCGATTGGGTTTCAATCAATGTCAAGGCTGGTATTTACAGGGAGAAAGTGTCGATTCCAAGTGATAAACCATACATAATATTAAAGGAAACCGAAAAGAAGAAAACATGGATTGAATGGGGTGACCATAATACAACCGCTTAG 269 0.3717 VVNTQYYRTVGDKILPFSKIVVNFFGHDNFSTIQSAIDSVPSDWVSINVKAGIYREKVSIPSDKPYIILKETEKKKTWIEWGDHNTTA 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00697 88 PANTHER PECTINESTERASE 10-RELATED 14 87 - -
Aip02g00697 88 Pfam Pectinesterase 20 80 IPR000070 GO:0030599|GO:0042545
Aip02g00697 88 Gene3D - 4 88 IPR012334 -
Aip02g00697 88 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 14 87 - -
Aip02g00697 88 SUPERFAMILY Pectin lyase-like 20 84 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00697 Aip-Chr2 10348901 10349441 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00697 20 83 Carbohydrate Esterase AT5G47500 41.791 4.25e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00697 - - aip:110268702 174.096