Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00662 ATGCTGCATGATCTAATAAAGCATGGAACCTTTACAAGAGTTTTGTGGGAAGCAAACATTGATCCTTATGTGATTCTCTCATACCGTTCTCAAGAGCACAAAAGCACTGTGGCAGAAGGTGCTGGATCCAACCCACAATGGAATGAAAGCTTTCTTTTCACTGTTTCTGACAGTGCTTGTGAGCTTAATCTGAAGATCATGGATAAAGACAATTTTAGTCAAGATGATTTCCTTGGCGAGGCAACGATTACTCTTGATGCAGTGTTTGATGAGGGTAGCCATCCAGAGACTTCTTACAATGTTGTGAAGGACAAAGAATACTGTGGAGAGATCAAGGTTGCTCTCACTTTTACTGCTGAGAGAGGTGGTGCTGGCCGGGACGAATACGGTGGACAGGAGGAGAGTTATGGTGGATGGAATGAATCAGCCAGGGACTTTTAG 441 0.4376 MLHDLIKHGTFTRVLWEANIDPYVILSYRSQEHKSTVAEGAGSNPQWNESFLFTVSDSACELNLKIMDKDNFSQDDFLGEATITLDAVFDEGSHPETSYNVVKDKEYCGEIKVALTFTAERGGAGRDEYGGQEESYGGWNESARDF 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00662 146 Pfam C2 domain 18 100 IPR000008 -
Aip02g00662 146 MobiDBLite consensus disorder prediction 123 146 - -
Aip02g00662 146 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 19 146 - -
Aip02g00662 146 Gene3D C2 domain 4 119 IPR035892 -
Aip02g00662 146 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 20 118 IPR035892 -
Aip02g00662 146 SMART C2_3c 1 97 IPR000008 -
Aip02g00662 146 ProSiteProfiles C2 domain profile. 1 98 IPR000008 -
Aip02g00662 146 PANTHER C2 DOMAIN-CONTAINING 19 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00662 Aip-Chr2 9804509 9806465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00662 1 113 C2H2 Transcription Factor Family AT4G21160 31.858 1.90e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00662 - - adu:107473142 263.848