Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00661 ATGGCCTCCTTCTTTAACCTATTGATGATCATCATCTTTAGCTTCAAGAATTTTGCATCCACAAAAGCACAGGGTCCTAACTATCTCTTCATATATTGCGTGCTTCAAAACTTTACCGCCAACAGCACCTACCAAACAAACCTCAGGACTCTCTACTCTTCCTTATCTTCCAAAGCCAAAAACAGCATCGAATTCTACAACACGACCATCCGCCACGCCCACTCCGACGACACAGCTTACGGAATGTTCATGTGCAGGGGCGACACACCCTCCGCGCAATGCGGAGAGTGCGTCCAAAACGCAACCCTAACGCTGTTAAGCAATGGCTGTAAATCCTCCATAGAAGGGCTTGTATGGTACGACCAGTGCATGGTTAGGTATTCAAACACGTATTTCTTCTCCAAGTTATCCATGGAGCCATTCAAGGAGTATGTTAGTCCTACCAAACAGATTTACCAAGGAACCTTCAACAGAACCTTGTTTGAGACACTGAACAAGACGGCGGAGGAGGCGGCCAAGGCGCCGACCGGAAAGAAGAAGTTTGCGACGGAAGAAGCAGATCTGCCGGAGTTTCAGAAGCTTTACTGTTTGGCTCAGTGCACACCGGATCTGTCGCCGGAAGATTGCAGGAGTTGTTTGAACGTTTCTATAAACGGGAACGTTCCGCGGTGTTGTGGAGGAAGGGAGGGAGGGAGGGTTATGTATCCAAACTGCATGATCAGGTTTGAGCTTTACACTTTCTATGGATCTCCATCATCCCCTGCTCCAGCACCAACAGGTGTACTTCTCACTCCCCCCACAGAAGATAAGAGAAGTCGATCACGAACAATTATCTTAATTGTTGTTCCTATTGTTGTGGTGATACTCTTCACTTGTTTTTGCTATTTGCTAAGAAGAAGAGCAAGAAAGAGCCTTAAAACTATTCTCAGAGAAAATTTTGGTCATGAAAGTACCACTTTAGAAGGATTGCAATTTGATTTGAACGTACTTAAAGTGGCTACAAACAACTTTTCACTTGAGAACCTTATTGGCAAGGGAGGATTTGGAGAAGTTTATAAGGGCATTCTTCTTGATGGACGATTTATAGCTGTGAAAAGACTGAATACAAGTTCTAGACAAGGTTCAGATGAATTCAAGAACGAGATTTTATTGATAGCCAAACTTCAACACAGAAATCTTGTAACTTTGATAGGCTTTTGTCTCGATGAGCAAGAAAAAATTCTTATTTACGAATATATGCCAAATAGAAGTCTCGACTACCATTTATTTGGTGATCAACAACATAAATTAAGTTGGGTTGAACGTTTTAAAATTATTAAAGGGACTGCTTCAGGACTTCTTTATTTGCATGAATATTCTAGATTCAAAGTTATTCATCGAGATCTAAAATCTAGTAACATTTTATTAGATGAAGATATGAATCCAAAAATTTCAGATTTTGGTATGGCACGAATAGTTGATATAAATCAAGAAAAAGGAGAAACGAACAGGATTGTTGGTACATACGGGTATATGTCTCCCGAATATATAATGTTTGGACAATTTTCTGAAAAATCAGATATTTTTAGTTTTAGAGTCATAATTCTAGAACTTATTTACGGAGAAAAGAATGCACGCTTTCATGAATCACATGAAGAAAGCCTTTTAAGTTATGTTTGGAGACAATGGCAAGATGGAACACCTTTCAACACATTGGATCCAAATCTGAAAGAAAGTTATCATGTGGTGGAAGTCATGAAATGCATTCAAATTGGTTTATTATGTGTTCAAGAGAATATAAATGATAGACCCTCAATGGTGACAGTTGTTTCATATCTTAATAATCTTTCACTTGAATTACCATCTCCACATGAACCAGCATTCTTCACTCTTGGTAGATTCATGGATCCTAAAATCACAAATGAATCAAGTTCTAGCCAATCTGCCAAGAGTTTATTTTCAGTGAATGAAATGTCAATAAGTAAATTTCATCCTCGGTAG 1980 0.3924 MASFFNLLMIIIFSFKNFASTKAQGPNYLFIYCVLQNFTANSTYQTNLRTLYSSLSSKAKNSIEFYNTTIRHAHSDDTAYGMFMCRGDTPSAQCGECVQNATLTLLSNGCKSSIEGLVWYDQCMVRYSNTYFFSKLSMEPFKEYVSPTKQIYQGTFNRTLFETLNKTAEEAAKAPTGKKKFATEEADLPEFQKLYCLAQCTPDLSPEDCRSCLNVSINGNVPRCCGGREGGRVMYPNCMIRFELYTFYGSPSSPAPAPTGVLLTPPTEDKRSRSRTIILIVVPIVVVILFTCFCYLLRRRARKSLKTILRENFGHESTTLEGLQFDLNVLKVATNNFSLENLIGKGGFGEVYKGILLDGRFIAVKRLNTSSRQGSDEFKNEILLIAKLQHRNLVTLIGFCLDEQEKILIYEYMPNRSLDYHLFGDQQHKLSWVERFKIIKGTASGLLYLHEYSRFKVIHRDLKSSNILLDEDMNPKISDFGMARIVDINQEKGETNRIVGTYGYMSPEYIMFGQFSEKSDIFSFRVIILELIYGEKNARFHESHEESLLSYVWRQWQDGTPFNTLDPNLKESYHVVEVMKCIQIGLLCVQENINDRPSMVTVVSYLNNLSLELPSPHEPAFFTLGRFMDPKITNESSSSQSAKSLFSVNEMSISKFHPR 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00661 659 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Aip02g00661 659 Gene3D - 141 247 IPR038408 -
Aip02g00661 659 Gene3D - 26 132 IPR038408 -
Aip02g00661 659 ProSiteProfiles Gnk2-homologous domain profile. 26 132 IPR002902 -
Aip02g00661 659 Pfam Salt stress response/antifungal 153 245 IPR002902 -
Aip02g00661 659 Pfam Salt stress response/antifungal 36 129 IPR002902 -
Aip02g00661 659 SMART serkin_6 337 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00661 659 CDD STKc_IRAK 343 609 - -
Aip02g00661 659 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 265 632 - -
Aip02g00661 659 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 17 254 - -
Aip02g00661 659 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 254 - -
Aip02g00661 659 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 265 632 - -
Aip02g00661 659 ProSiteProfiles Gnk2-homologous domain profile. 138 247 IPR002902 -
Aip02g00661 659 Gene3D Phosphorylase Kinase; domain 1 300 412 - -
Aip02g00661 659 SUPERFAMILY Protein kinase-like (PK-like) 321 632 IPR011009 -
Aip02g00661 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Aip02g00661 659 Gene3D Transferase(Phosphotransferase) domain 1 413 615 - -
Aip02g00661 659 Pfam Protein kinase domain 339 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00661 659 ProSiteProfiles Protein kinase domain profile. 337 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00661 Aip-Chr2 9778467 9782648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00661 2 659 Receptor kinase-like Gene Family AT4G05200 42.669 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip02g00661 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00661 - - ahf:112729661 1214.13