Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00653 ATGGGTTCAATTCTCAAATTTCGTAACATATATGGTTCCTTTAAATGCTTTCATTCTAAACCTAATTGGGGTTCCGGTGCTTCAGATAAAACCCCCAAATTGGAACCAAATAGGAATAACAATAGGGTAGGGATTTTTTGGGACTTAGATAACAAGCCACCAAACTCAATTCCACCTTTTGAAGTTGCCAATAAGCTTAGAATTGTTGCATCTTCATTTGGGGTTGTTAGGCATATGGTAGCTTATGCAAATAGTCACACTTTCACCGGTGTCCCACACGCTGTTCGGCAGTGGAGGAAAGAGAAGGAGCTGTATAACCGATTGGAGAGCAAAGGCGTCATCAAGCGGAATGAGTCTCATGTTTGCAGGGTTTGTGGGAGAAAGTTTTACACTAATGAGAAGCTTGTTAACCATTTCAAGCAGCTACATGAGAGCGAGCAAATGAAAAGGGTGAACCAGATAGCATCGGCAAGGGGGAACCGGAGGGTGAAGTTGGTGGCAAAGTATTCGATGAAGATGGAGAAGTATAAGAAGACTGCAAGGGATATTCTTACTCCAAGGGTGGGGTGGGTTGAATGCATAGTAGTTGTGTCGGATGATTATGATTTCGCTAATGTAATAAGGGAAGCGAAGCTACGATGTCTAAAGACAGTTGTCATCGGGGATACTAGTGATGGTGTATTGAAGAGGATTGCTGATACCTCCTTTTCTTGGGAGGAAATCCTAATGGGGAAAGCTAGAAAGGAGGCTATATCGGTTGTTGAGAACTGGAAGGATGTGATATTTTGA 789 0.4259 MGSILKFRNIYGSFKCFHSKPNWGSGASDKTPKLEPNRNNNRVGIFWDLDNKPPNSIPPFEVANKLRIVASSFGVVRHMVAYANSHTFTGVPHAVRQWRKEKELYNRLESKGVIKRNESHVCRVCGRKFYTNEKLVNHFKQLHESEQMKRVNQIASARGNRRVKLVAKYSMKMEKYKKTARDILTPRVGWVECIVVVSDDYDFANVIREAKLRCLKTVVIGDTSDGVLKRIADTSFSWEEILMGKARKEAISVVENWKDVIF 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00653 262 PANTHER - 31 189 - -
Aip02g00653 262 PANTHER - 191 259 - -
Aip02g00653 262 ProSiteProfiles Zinc finger C2H2 type domain profile. 120 148 IPR013087 -
Aip02g00653 262 ProSitePatterns Zinc finger C2H2 type domain signature. 122 143 IPR013087 -
Aip02g00653 262 PANTHER ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN 31 189 - -
Aip02g00653 262 PANTHER ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN 191 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00653 Aip-Chr2 9724273 9725178 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00653 42 259 C2H2 Transcription Factor Family AT4G12240 52.140 5.97e-93 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aip02g00653 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00653 - - aip:107624837 387.882