Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00650 ATGGCGATGGTGAAGAGGCAAAGGATGTTGGAATGCGAAAAGGAAAACATGGAGAAGAAGCCCTTCATGGACATACAAACTGAGACCAAGAGATTCAGGCAAACAACACTTGATTTGATTTTCATTTatagcattcagcaacaatcgttacaaatcaTAGTGACTGGAGCAAACAAAGGAATTGGAATAGAAATAGTAAGGCAATTAGCTTCAAATGGAGTGAAGGTTGTGTTGACTTCAAGAGATGAGAAGAGAGGCCTTCATGCTTTGGAAACTCTCAAAGATCTCTCTCATCTTGTCCTCTTTCACCACCTTCATGTTGCTGATCCTGCTAGTGTGGATTCTCTTGCAAATTTCATCAAATCCGAATTTCGAAAACTCCACATTTTGATCAACAATGCAGGGATTGGTGGACTTGTGATTAAGGACAATGATTTGGTCCCTCAAGTGTTATTGAAAAGCAGGGAATTATCAGATGATGTAATAGAGAAAGCCGGAATCGTTCAAACATTCGAGCTAGCTGAAGAATGCTTGCAAATAAAATATTATGGTGCTAAAAGAATATCTGAAGCCCTTCTCCCTCTTCTCCAATTATCTGAATCACCAAGAATTATGAATGTATCATCCTCCCTAGGAAAGTTAAAGAGTGATGTTTCTTCATTCGAATTCAAATTGGAGGAAGACTATAGTACTAGTGTTATCAATTTTGGACATTGGACACAGCGGCTCTGA 732 0.3743 MAMVKRQRMLECEKENMEKKPFMDIQTETKRFRQTTLDLIFIYSIQQQSLQIIVTGANKGIGIEIVRQLASNGVKVVLTSRDEKRGLHALETLKDLSHLVLFHHLHVADPASVDSLANFIKSEFRKLHILINNAGIGGLVIKDNDLVPQVLLKSRELSDDVIEKAGIVQTFELAEECLQIKYYGAKRISEALLPLLQLSESPRIMNVSSSLGKLKSDVSSFEFKLEEDYSTSVINFGHWTQRL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00650 243 Gene3D - 47 240 - -
Aip02g00650 243 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 52 214 IPR036291 -
Aip02g00650 243 Pfam short chain dehydrogenase 52 216 IPR002347 -
Aip02g00650 243 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 53 217 - -
Aip02g00650 243 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 53 217 - -
Aip02g00650 243 PRINTS Glucose/ribitol dehydrogenase family signature 125 136 IPR002347 -
Aip02g00650 243 PRINTS Glucose/ribitol dehydrogenase family signature 51 68 IPR002347 -
Aip02g00650 243 PRINTS Glucose/ribitol dehydrogenase family signature 196 212 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00650 Aip-Chr2 9657750 9686442 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00650 1 58 AtRKD Transcription Factor Family AT4G35590 39.655 3.76e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00650 K15095 - gmx:100801677 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00650 02 9657750 9686442 Aip02g00650 02 9657750 9686442 ECH