Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00622 ATGGCATTTAGATACTTGTTTGCCTTCTTGTTGGCTTTATGCCTCTCACACCCTCCTCATTCTGTTCTTGTTGCACAAAATTTGCCATACAAAGCTGTGAATCTAGGAAATTGGTTGCTTGCTGAGGGATGGATGAAACCTTCTCTCTTTGATGGAAATGCCAACAAAGGATGGAACTCAAGTGCAGCTAATGCCACTAAGTTCCAGAAATATCTCGCCGCAGAAAATGGAGGAGGAGCTGATCTTGTTGCCAACTGTACTTCAGCTTCTGCTTCAGGTTGGGAAACATTCAAGCTATGGTGGGTCAGTGACACATCTTTCAATTTTAGAGTGTTTAACAAGCAATTTCTTAGGATGGAAAAGCAATTTCAAGCTGATTTTTGTCCTTCACCTCCGGAAGCGCCAAGCCTTTTGTTGTTTATTAAGATAATGGTTTTGCTAATGAATATACCAAAATCATTTGAATGGGCTTGGCAGCACCCTGTCGAATCCTTGGCCGTAAGGAAGGCAGCTGCAAATTTTAAATCCCTTTCGGGAGTTGCCAATAAGATCAAACTCGCATACACAATGCTCACCCTACCATCTTGGCAGAGAAATATAGACTTGGGAAAAGCCAACCACAACTTGAAATCTGTTTTGGCAATAACAAACATGAAGCAGTTTCAAACAAATAATAATCTGCAAGTACTCACATTGTCCATGGGAAGTGGTAGTAATAAGGATTCATCAACAACCAGCTGTGACAATAACAGCATTATTGAAGCCCCACCTTCTAATGGAAGAACTCTAGATACCTTTGGCCAGAGAACTTCAATATACCGTGGCGTAACAAGACATAGATGGACTGGAAGATATGAAGCTCATCTTTGGGATAATAGCTGTAGAAGGGAAGGAGAAAAGGTCGCCAAGGCAACGGCTGCATATGCAACGCCGCCCAAAAACGTTGCCTTAGGCGGTTCCAAGCACACAAACAGCCTCACCTCTGACGACGACGGTTATCTTCGGCAGTTGATGGCTTCGCCGTCTCCATCAATGGAAAGAAGGGTTGCCGGGGATGAAGATACCACTAGGGGCGTGCACGTCGCCGATGAACCAGAAATGTCTGACGGAGCAGAGCACGGAGTTGGATCGTTTGAGGGTGAAGGCTTTGCAGGGATGCAGTCAGACGAGTACGACTTTCAGGAAGATGAAACAGAACACGACCATCATGCAGAGGCCGATGTCGACAATGGGGATGCGGTTGAATTGGAAGACAGTTTGGACGGCGCCGGAGGTATGTCTGACAATTATGCGGAAGACGAGTTTTACGCTGTTGATTCCGTGGAGTCGATAGGTTGGATTGATTTTTTGAACTTGAGCGAGGAGGATGTTTTCCGGTTTAATTTCGCAGACGTTGACATTGCATTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTTCGGGGCGAGACGTTCCAGAAGCGAAAAACGCGGCGAAGTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGGGTACCGATCCCCGAAGTTCTACTCGATGCCTAACCGGCAAAAGAGGCCGAGGGCCGAGACACGTTGTGGATGCCCTGCAAGGATGCTACTCCGCATGGACGATGAATCAGGACGTTGGCTCGTTGTGTACTTTTCAGACGCGCATAACCACCACGTTCTTGAGTTGCGATTTTCTTCCATGCTTCCAGGCCATCGGAGGATGAGCGAAGCGGACATCGAGCAGATGAACGACATGCGCAAAGGGGGCATTGGCGTATCTCGAATCCACGGTTTTATGGCGAGCCTAGCCGGCGGGTATCATAATGTCCCGTACACAACAAGGGACATGCACAATGTAAATGCGAAGCAACGAAGGGAGGGTGGCCTAGATGCGGAATCGTGCCTAAGGTATCTCCGAGAGTGCAAGACAAATGATCCAGCACTGTACTACAAGGAAGTTGTTGACGGTGAAGGCGTGTTGCAATATTTGTTTTGTATTCTCCGGTGTGAATCACCACAACCAAACGGTTGTCTTTGCCGCTGCACTGGTGGCAGACGAGAAAGAAGAGACCTATGCTGGCTGCTTCAACAGTTGCAAACTTCAATGAAAGGGAAGGCTCCCGTGTCCATAATAACCGACGGTGACAGGCAAATGAAGTCTGCGATCGAGCAAGTTTTTCTGGAGGCTCACCATCGACTCTGCGCTTGGCATCTACTCCGAAACGCCACGAGCAACATCGGAAAGCCCAAATTCACCAGGATGTTTAGGAATTGCATGCTTGGCGACTACGGGGTCCGAACATTCCAGAGAAAGTGGTTTGAGATGGTTGAGAAATTTGGTGTCGCCGATAAAAGATGGGTACAGGACATGTACGAGAGAAGGCACAGTTGGGCCACAGCACACATACGGGGAAAGTTCTTTACCGGATTTCGAACAACGTCAAGGTGCGAGGGCTTGCATGCTGTGATATCACGGTATGTTAAGTCTCGATACAGCTACACTGAGTTTTTACGTCATTTCCATCGATGCTTGATGTTCGTGCGTGCAAAGGAGGTGGAGGCTGATTTCGAGTGTGCAAAGGGCGACCCTGTTATGACCACCAACCTGAAACAGCTGGAGCGGAGTGCAGCCGAGAACTACACTCGTGCAATATTCTATTTGTTTGTTCCCATTCTTGACAGGGCCTGTGCAATGAGGGTGGTTGACTCTGAAGACAACGGTTCCTATTTTATCCACACCGTCTCTCGATACGGCACTCCGGGGAAGGATTGGCGTGTTGTTGCAACATCTGATACGAGGGAGGTCCGATGCACGTGCATGAGAATGGAATGTTTCGGGGTCCTCTGCGAACATATAATTGCGGTGCTTGTTCTTAACAATGTTCATGAGATCCCGAGGTCCCTGATATTGCCGAGATGGACCAAGGATGCAAAACTTGTGGCGGTGCAGTCGATGGGCGTGATTTGGGATTCTGTACAACTGACGCAACACTGGTGCCTGATGGATTGGTACCAAAAAGTGTGCAAGATTGCATGTCACAGCACTGAAAAGTTCCAGTTTGCAAGAGACACTGCCATGCTGATGCTGAAGCACTTTGAGAACGAAGATGCAGGGGACACCAGTTTTCCACCCGAGGGGCCACCTACTGAAGGTGGAAGGGGCCCGGCGCAGAATCCACCCAGGCGCAATACAAAGGGTAACGGTGCTCATGGTGGAAAGAAAACCCAACGATGTCGTTTCTGCCGGGAGGTGGGACACAACAGGACGACGTGTCCGGAACGCCGCACAATGGAGTCATCCAGCGCAGTTGCAGATGACATGGATTCGATGGACACTGACATGCTCTATGATAACCTATCCGGCGATCTGTATGCGACCGCCGAGATTCATTCGTTCCAATGCTTCGATAGTGACACGCAGGCTGGGTTTGCTAACAGCGACTTCGCTGGGACCAACACGTCCGGGCCTGTCATGTCTCTCGCCGATTGA 3486 0.49 MAFRYLFAFLLALCLSHPPHSVLVAQNLPYKAVNLGNWLLAEGWMKPSLFDGNANKGWNSSAANATKFQKYLAAENGGGADLVANCTSASASGWETFKLWWVSDTSFNFRVFNKQFLRMEKQFQADFCPSPPEAPSLLLFIKIMVLLMNIPKSFEWAWQHPVESLAVRKAAANFKSLSGVANKIKLAYTMLTLPSWQRNIDLGKANHNLKSVLAITNMKQFQTNNNLQVLTLSMGSGSNKDSSTTSCDNNSIIEAPPSNGRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGEKVAKATAAYATPPKNVALGGSKHTNSLTSDDDGYLRQLMASPSPSMERRVAGDEDTTRGVHVADEPEMSDGAEHGVGSFEGEGFAGMQSDEYDFQEDETEHDHHAEADVDNGDAVELEDSLDGAGGMSDNYAEDEFYAVDSVESIGWIDFLNLSEEDVFRFNFADVDIAFEFYQQYAKHHGFGARRSRSEKRGEVRIRQEFVCHRQGYRSPKFYSMPNRQKRPRAETRCGCPARMLLRMDDESGRWLVVYFSDAHNHHVLELRFSSMLPGHRRMSEADIEQMNDMRKGGIGVSRIHGFMASLAGGYHNVPYTTRDMHNVNAKQRREGGLDAESCLRYLRECKTNDPALYYKEVVDGEGVLQYLFCILRCESPQPNGCLCRCTGGRRERRDLCWLLQQLQTSMKGKAPVSIITDGDRQMKSAIEQVFLEAHHRLCAWHLLRNATSNIGKPKFTRMFRNCMLGDYGVRTFQRKWFEMVEKFGVADKRWVQDMYERRHSWATAHIRGKFFTGFRTTSRCEGLHAVISRYVKSRYSYTEFLRHFHRCLMFVRAKEVEADFECAKGDPVMTTNLKQLERSAAENYTRAIFYLFVPILDRACAMRVVDSEDNGSYFIHTVSRYGTPGKDWRVVATSDTREVRCTCMRMECFGVLCEHIIAVLVLNNVHEIPRSLILPRWTKDAKLVAVQSMGVIWDSVQLTQHWCLMDWYQKVCKIACHSTEKFQFARDTAMLMLKHFENEDAGDTSFPPEGPPTEGGRGPAQNPPRRNTKGNGAHGGKKTQRCRFCREVGHNRTTCPERRTMESSSAVADDMDSMDTDMLYDNLSGDLYATAEIHSFQCFDSDTQAGFANSDFAGTNTSGPVMSLAD 1161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00622 1161 Gene3D - 53 126 - -
Aip02g00622 1161 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 691 1035 IPR031052 GO:0006355
Aip02g00622 1161 Gene3D AP2/ERF domain 272 322 IPR036955 GO:0003700|GO:0006355
Aip02g00622 1161 MobiDBLite consensus disorder prediction 1035 1074 - -
Aip02g00622 1161 Pfam FAR1 DNA-binding domain 470 559 IPR004330 -
Aip02g00622 1161 MobiDBLite consensus disorder prediction 312 381 - -
Aip02g00622 1161 PANTHER OS03G0181600 PROTEIN 461 663 - -
Aip02g00622 1161 PANTHER OS03G0181600 PROTEIN 691 1035 - -
Aip02g00622 1161 ProSiteProfiles Zinc finger SWIM-type profile. 923 959 IPR007527 GO:0008270
Aip02g00622 1161 MobiDBLite consensus disorder prediction 238 258 - -
Aip02g00622 1161 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 461 663 IPR031052 GO:0006355
Aip02g00622 1161 SUPERFAMILY Retrovirus zinc finger-like domains 1062 1097 IPR036875 GO:0003676|GO:0008270
Aip02g00622 1161 MobiDBLite consensus disorder prediction 317 331 - -
Aip02g00622 1161 MobiDBLite consensus disorder prediction 393 425 - -
Aip02g00622 1161 MobiDBLite consensus disorder prediction 396 410 - -
Aip02g00622 1161 Pfam MULE transposase domain 689 740 IPR018289 -
Aip02g00622 1161 SUPERFAMILY (Trans)glycosidases 27 60 IPR017853 -
Aip02g00622 1161 MobiDBLite consensus disorder prediction 347 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00622 Aip-Chr2 9353370 9363554 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00622 214 299 AP2-EREBP Transcription Factor Family AT1G51190 54.808 4.62e-24 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g00622 FAR1 3.7e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00622 - - aip:107647116 1437.17