Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00619 ATGGCTTCTCTACTCCCTCCAACTCCAACTGTCACTGCCACATTCCAACAGCATTATTGTTATTATAATTTGCATAACAACCAAATAGCGGCAATCTGCTGCTTCTCACCTCCTCACAAAAAACTACTCTCCATCACTTCAAAGAGGAAGAGTAGGAGGGGCCTCATCAGGTGCAATGCTTTCTTTGATGACGTGGCAACCGGTTTGTTGGAGTTGGAGAATGCTCCTTACTTTCAGGGCTTATCGGAGACGCAGCGGTGGTGGATAGTGGTTTTTGGCGGCCTTGCTTGGATTTATTTCACTGCAAGGCCCGGGGTTCTCGTCGGCGCCATCGATGCATACCTTCTGGCCCCTCTTCAGCTCGCGCTGGACAGTCTTTCCGGAAGGAGGAACCTCAAGAGGACTGATTTTCTCGTCGGAGAAAAGCTCGGCGAGGGCTCCTTCGGTGTTGTGTACTCTGGTGTACTCCTCCCAAAGAATCTCAATGACTCGCCGGCGGACCAGAAGAGGCCACGACGGCCTCCGCCTCGGTCTGCTCTTGTTCCCCAATCTCAATCTAAGGACAAAGTCATTCTTAAAAAGGTGAAGGTTGAGATCAAAGGGGCCCGAGAATTCGGTGATTTTGAGGAGTGGTTTAACTACAGGCTCGCTAGAGCAGCACCCGAAACATGTGCCGAATTCCTTGGAAGTTTTGCAGCTGATAAGACAAATTCACAGTTCACAAAAGGTGGAAAATGGCTTGTTTGGAAGTTTGAGGGAGATCTCACTCTTGGTGATTACATGAAAGATCGCAACTTCCCCTCAAACTTAGAATCCCTCATGTTTGGACGAGTCTTGCGAGGCGCAGACTCTTCTAAGAGAAATGCCTTGATCATCAAGCAAGTCATGCGCCAGATTATTACCTCTCTTAAGAAAATTCACGACACAGGAATTGTTCACAGGGATATAAAGCCAGACAACTTGGTGGTTACTAAGCGTGGTCGGATTAAACTCATTGATTTTGGTGCTGCAACTGACCTACGGATTGGAAAGAATTATGTTCCCAACAAGACACTACTGGATCCTTATTACTGTCCCCCGGAATTATATGTACTTCCAGAAGAAACGCCGAGTCCTCCACCAGAGCCAATTGCAGCTCTCCTTTCGCCAATCTTGTGGCAGTTAAACAGTCCTGATCTGTTTGATATGTATTCGGCTGGGATTGTGCTTCTGCAAATGGCAATACCATCATTGAGGTCTTCTGCTGCTTTGAGGAATTTCAATCTGGAAATAAAAAGCTGCGGATATGATTTGAAAAAATGGAGAGACTATACTCGCCTCAGGCCTGATTTTCAAATTCTGGATAGTGAATCTGGTAGAGGGTGGGACTTAGCTACAAAGCTTATATCGGAGAGAGGCAGCTGCAGTCCTCTCGAAATTAAGCTTAGACAGAAAGTGATCCGCCTAGCAAAGAGAAGCACATTTGAAGACCACCCGACTTATGAACTGACAACCATCAGTTATAAGATTTTGTTCGTTTGTTCTTATTTTTCCTGTTTGGTTTTTTTCTCCTGGTATAAGTCAGGGGAAGACTTTATACACAGTTTCAGCCACAGAGAGGTGATTGGTCTGAGAATGCCAGGACCTTGCCTGTGGTACCATATATAA 1647 0.4608 MASLLPPTPTVTATFQQHYCYYNLHNNQIAAICCFSPPHKKLLSITSKRKSRRGLIRCNAFFDDVATGLLELENAPYFQGLSETQRWWIVVFGGLAWIYFTARPGVLVGAIDAYLLAPLQLALDSLSGRRNLKRTDFLVGEKLGEGSFGVVYSGVLLPKNLNDSPADQKRPRRPPPRSALVPQSQSKDKVILKKVKVEIKGAREFGDFEEWFNYRLARAAPETCAEFLGSFAADKTNSQFTKGGKWLVWKFEGDLTLGDYMKDRNFPSNLESLMFGRVLRGADSSKRNALIIKQVMRQIITSLKKIHDTGIVHRDIKPDNLVVTKRGRIKLIDFGAATDLRIGKNYVPNKTLLDPYYCPPELYVLPEETPSPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPSLRSSAALRNFNLEIKSCGYDLKKWRDYTRLRPDFQILDSESGRGWDLATKLISERGSCSPLEIKLRQKVIRLAKRSTFEDHPTYELTTISYKILFVCSYFSCLVFFSWYKSGEDFIHSFSHREVIGLRMPGPCLWYHI 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00619 548 ProSiteProfiles Protein kinase domain profile. 137 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00619 548 MobiDBLite consensus disorder prediction 161 185 - -
Aip02g00619 548 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 1 467 IPR044803 GO:0004674|GO:0009579
Aip02g00619 548 SUPERFAMILY Protein kinase-like (PK-like) 134 409 IPR011009 -
Aip02g00619 548 SMART serkin_6 137 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00619 548 Gene3D Transferase(Phosphotransferase) domain 1 280 490 - -
Aip02g00619 548 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 1 467 - -
Aip02g00619 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Aip02g00619 548 Pfam Protein kinase domain 291 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00619 548 Gene3D Phosphorylase Kinase; domain 1 124 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00619 Aip-Chr2 9304227 9306930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00619 137 362 MAP Kinase Kinase Kinase AT3G13530 23.009 5.76e-09 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Aip02g00619 Pkinase 5.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00619 - - gmx:100788727 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02472 04 110954187 110958037 Aip02g00619 02 9304227 9306930 PCT