Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00617 ATGCTAGATGTAAAGCTTCGTCGATTATTCACGTTATTGAGCAATGTCCTCGGAATCGGAATCGAATCGGTGTTGGTAAATTTGTCTAAAGGCCATGCAGTGGAAAGTTTCCCTCTATTGAAGGAGGGACAAGGGCAAGGGCAAGGGCAAGGGCAGGAGCAGGGTCAAGGAACGCCAATGGATTCGCATCGGCGTTCGCATTCGAATTCTCTCTTGCCATTTGAAATATGTGAGAATAGTAAACCTCATCATCATCATCATCATCATCATCATCATCGGAGTCGGAGTCGCTTCAAAAGCGGGCAGTTCGATGACGGCTTTTACGTGCATGAAGCCAATGCCAGGTCTGTGTACATAAACGATCCCAAGAGAACCAACGAGAACTATGAGTTCACGGGGAACGAGATCAGAACAAGCAGCTACACTTTGCTTACCTTCTTGCCTAAGAATCTCTTCATTCAGTTCCACAGAGTTGCTTATCTCTATTTCCTTGCCATTGCCGCTCTCAACCAGCTTCCTCCATTGGCTGTCTTTGGAAGAACCGCCTCTCTCTTCCCCCTCCTCTTCGTCCTCTGTGTCACCGCCATCAAAGATGGCTACGAGGATTGGCGCAAGCACCGCTCCGATCGATTCGAAAACAACCGGGACTGCCTCGTGCTTCAGGAACATGGTAACTTCCGCCCCAAGAAATGGAACAGAATACAAGCCGGCGACGTGGTTAAGATCTCCGCCGACGAGATGATCCCGGCCGACATAGTCTTGCTAGGAACGAGTGATCAGAGTGGGATTGCCTACATTCAGACCATGAATCTGGACGGAGAATCGAACCTGAAAACAAGGTTTGCGAGGCAAGAAACGGTTACGGCAGTGACGTCAGAATCGTGTGGAGTCACGGGAGTTATCAGATGTGAGAAGCCTAACAGGAACATCTATGAGTTTGCAGCCAACATGGAGTTTAACGGGAACAAGATTCCGCTGAACCAATCCAACATCGTGCTTCGGGGTTGCGTGTTGAAGAACACTGACTGGTTAATCGGAGTGGTGGTGTGTGCTGGACAGGAAACAAAAGCAATGCTCAACAGTGCAGCTGCTCCTCCCAAGAGAAGCAAGCTGGAGATATACATGAATAGAGAAACCGGTTGGCTCTCGATTTTTCTTTTTGTGATGTGCTCCGCCGTGGCCCTTGGGACGGCCGTGTGGCTCGTTCGCCACAAGCAACAGCTCGAGACCTTGCCTTACTACAGGAAGACATACCTCAACCTTGGCCCCCATTTTGGACAAGTTTATAGATACTACGGCATACCCATGGAAATACTCTTCTCCTTTCTCAGTTCCGTTATTGTCTTTCAGATCATGATTCCGATTTCTCTCTACATTACAATGGAGTTGGTTCGTGTGGGACAGTCTTACTTCATGGTGGAAGACATGGATATGCATGATTCTTCTTGTGGATTAAGATTCCAGTGCAGGTCCTTCAATATAAATGAAGATTTGGGTCAGATACGTTATATATTCTCTGATAAGACTGGAACTCTCACAGAAAACAAAATGGAATTCCGGAAAGCTAGTGTGTTTGGAAAAAATTACGGAAGCTCCATGCCTGTGCCTCCTGCAGTTAAAAGTAAACGAAGATGGAAGCTCAAATCTGAAATTCCCATCGATTACGATCTGATGACATTGTTGCAGAAAGAAGAAGATCCAAGTAGCGAGGAAAGAGTTGCTGCTCACGATTTTTTCATCACGTTGACTGCTTGTAACACTGTGATCCCTGTTGTTAATGGTTCTAAGCCTTCCAAGGAAGATGATGGTGTAGTCAGCATTGATTACCAGGGAGAGTCTCCCGATGAACAAGCTCTGGTTTCTGCTGCCTCTGCATACGGTTATACTCTTTTTGAGAGAACAAGTGGACATGTTGTTGTTGACAAAAATGGTGAAAAAATCAGACTGGAAGTGCTGGGGATGCATGAGTTTGACAGTGTGCGGAAAAGAATGTCTGTTGTTATTCGGTTTCCGGACAATGCTGTGAAGGTGTTAGTTAAAGGCGCAGATACTTCCATGCTTAGCATCTTGGCAAATGACAAGGACAGTGTATGGCATGCGACGCAGACTCATCTGAATGAGTATTCTTTGGAAGGTTTGCGCACACTTGTGTTGGCTTCAAGAGATCTCTCAGAGGAAGAGCTTGAGGCGTGGCAAAGCGCCTATGCAGAAGCCAGCACAGCATTGTACGACCGGGCTATCAAATTGCGCCATGCAGCATCCCTCATTGAATGCAAGTTGAAGCTGCTTGGAGCTACCGGGATTGAAGACAGGCTGCAAGAGGGTGTCCCTGATACCATTGAGTGCCTTAGACAAGCTGGAATTAAGGTCTGGGTTCTAACCGGCGACAAGCAAGAAACCGCCATTTCAATTGGTGTCTCCTGCAAACTCCTTACTCCAGATATGCACAAGATTATCATAAATGCCAATTCCGAGGCTCATTGCAGAGATCTCTTGGTTCAAGCTAAAGCCAGATATGGTGTGAGACCTTCGGGTAAAGGACAGGGGAATGGCAAGTGCAAAACCATTGCTGATTTAGGAAAGGAAGAAGAAGAAGATACAGCTCCAATGGCACTCATAATTGATGGCACCAGCTTGCTTTTCGACCTTGCAACTGCCTGTAGGGTTGTGATATGCTGCCGGGTTGCACCCCTGCAGAAAGCAGGAATTGTTAATCTTATTAAGAGCCGCACAGATGATATGACATTAGCCATAGGAGACGGGGCCAATGACGTGTCAATGATCCAAATGGCGGACGTTGGTGTTGGAATATGTGGCCAGGAAGGGCGCCAAGCAGTGATGGCATCAGATTTTGCAATGGGTCAATTTCGGTTCTTGAGAAAACTACTACTGGTTCATGGTCACTGGAATTATCAGCGTCTTGGCTATCTAGTTCTTTACAACTTCTACCGTAATGCTGTCTTTGTTTTCATGCTATTTTGGTATATACTGTGCAGTGCTTTTTCTACAACTTCTGCCTTGACAGAGTGGAGTTGTGTATTATACTCCGTGATATACACATCAATACCTACCGTGATTGTTGGTGTTATGGACAAAGACTTGAGTCAGAAGACTCTGTTGCAGTATCCGAAGCTGTATGGTGCTGGTCACCGGCAAGAGGCTTACAATATTCGATTGTTTTGGTTAACAATGATTGACACACTATGGCAGAGCCTTGTTGTGTTCTTGATTCCAGTACTGACCTATCAGAACAGCTCAATTGATATTTGGAGCCTGGGCAGCTTGTGGACAATTGCGATTGTTATCCTTGTAACCGTGCACTTGGCTATGGATGTTAATGGTTGGATATTGATCATGCATGTTGCTGTATGGGGTTCAATTTTCATTACATATGGTTGCCTCATAGTATTGGACTCTATACCTCTCCTTCCGAATTACTGGACTATTTACCATCTAGCGTGCTCCCCAACATATTGGATAACAATTTTGCTTGTAACAGTTGTGGCATTGCTCCCTCGATTTGCATGCAAGGTTGCTTCTCAAATCCTATGGCCTTCAGATATTCAGATAGCTAGAGAAGTTGAGGCAATAAAAACTAGGCAACTCTATTGCATTGCATTCTTTGGCACTTGCGGTTGGATAGATCATCGGATGAGTAGCCGATGA 3666 0.4583 MLDVKLRRLFTLLSNVLGIGIESVLVNLSKGHAVESFPLLKEGQGQGQGQGQEQGQGTPMDSHRRSHSNSLLPFEICENSKPHHHHHHHHHHRSRSRFKSGQFDDGFYVHEANARSVYINDPKRTNENYEFTGNEIRTSSYTLLTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTASLFPLLFVLCVTAIKDGYEDWRKHRSDRFENNRDCLVLQEHGNFRPKKWNRIQAGDVVKISADEMIPADIVLLGTSDQSGIAYIQTMNLDGESNLKTRFARQETVTAVTSESCGVTGVIRCEKPNRNIYEFAANMEFNGNKIPLNQSNIVLRGCVLKNTDWLIGVVVCAGQETKAMLNSAAAPPKRSKLEIYMNRETGWLSIFLFVMCSAVALGTAVWLVRHKQQLETLPYYRKTYLNLGPHFGQVYRYYGIPMEILFSFLSSVIVFQIMIPISLYITMELVRVGQSYFMVEDMDMHDSSCGLRFQCRSFNINEDLGQIRYIFSDKTGTLTENKMEFRKASVFGKNYGSSMPVPPAVKSKRRWKLKSEIPIDYDLMTLLQKEEDPSSEERVAAHDFFITLTACNTVIPVVNGSKPSKEDDGVVSIDYQGESPDEQALVSAASAYGYTLFERTSGHVVVDKNGEKIRLEVLGMHEFDSVRKRMSVVIRFPDNAVKVLVKGADTSMLSILANDKDSVWHATQTHLNEYSLEGLRTLVLASRDLSEEELEAWQSAYAEASTALYDRAIKLRHAASLIECKLKLLGATGIEDRLQEGVPDTIECLRQAGIKVWVLTGDKQETAISIGVSCKLLTPDMHKIIINANSEAHCRDLLVQAKARYGVRPSGKGQGNGKCKTIADLGKEEEEDTAPMALIIDGTSLLFDLATACRVVICCRVAPLQKAGIVNLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLRKLLLVHGHWNYQRLGYLVLYNFYRNAVFVFMLFWYILCSAFSTTSALTEWSCVLYSVIYTSIPTVIVGVMDKDLSQKTLLQYPKLYGAGHRQEAYNIRLFWLTMIDTLWQSLVVFLIPVLTYQNSSIDIWSLGSLWTIAIVILVTVHLAMDVNGWILIMHVAVWGSIFITYGCLIVLDSIPLLPNYWTIYHLACSPTYWITILLVTVVALLPRFACKVASQILWPSDIQIAREVEAIKTRQLYCIAFFGTCGWIDHRMSSR 1221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00617 1221 Pfam Phospholipid-translocating ATPase N-terminal 117 182 IPR032631 -
Aip02g00617 1221 SUPERFAMILY Calcium ATPase, transduction domain A 220 357 IPR008250 -
Aip02g00617 1221 Pfam Cation transport ATPase (P-type) 612 687 - -
Aip02g00617 1221 Gene3D - 190 362 - -
Aip02g00617 1221 ProSitePatterns E1-E2 ATPases phosphorylation site. 507 513 IPR018303 -
Aip02g00617 1221 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 108 1201 - -
Aip02g00617 1221 SFLD p-type atpase 489 969 IPR044492 -
Aip02g00617 1221 SUPERFAMILY HAD-like 493 962 IPR036412 -
Aip02g00617 1221 PRINTS P-type cation-transporting ATPase superfamily signature 804 814 - -
Aip02g00617 1221 PRINTS P-type cation-transporting ATPase superfamily signature 505 519 - -
Aip02g00617 1221 PRINTS P-type cation-transporting ATPase superfamily signature 918 937 - -
Aip02g00617 1221 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 511 776 IPR023299 GO:0000166
Aip02g00617 1221 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 131 1193 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Aip02g00617 1221 MobiDBLite consensus disorder prediction 42 67 - -
Aip02g00617 1221 MobiDBLite consensus disorder prediction 43 67 - -
Aip02g00617 1221 Pfam E1-E2 ATPase 219 463 - -
Aip02g00617 1221 Gene3D - 605 737 IPR023299 GO:0000166
Aip02g00617 1221 Gene3D - 760 958 IPR023214 -
Aip02g00617 1221 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 108 1201 - -
Aip02g00617 1221 CDD P-type_ATPase_APLT_Dnf-like 133 1078 - -
Aip02g00617 1221 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 885 1004 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip02g00617 1221 SUPERFAMILY Calcium ATPase, transmembrane domain M 131 1181 IPR023298 -
Aip02g00617 1221 SFLD C1.7: P-type atpase like 489 969 - -
Aip02g00617 1221 Pfam Phospholipid-translocating P-type ATPase C-terminal 946 1186 IPR032630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00617 Aip-Chr2 9297393 9302085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00617 109 1199 Primary Pumps ATPases AT5G04930 56.098 0.0 1249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00617 K14802 - gmx:100812459 1698.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02467 04 110782998 110789230 Aip02g00617 02 9297393 9302085 PCT