Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00616 ATGAAAATGATTATGGAGGATGATGATATTGTTAGCAGGGAGGATGGTATAAAGGCAATAATAGAGGAGGAGCTTGTGAGAGGGCGTGAATTTGCCGATCAGTTAAGACAACTTATCGTCATCAATAAAGAAGATGATGACTCAGCTGATCATCAATGGCTTCTCAGTAACGTCCTCACCTCCTTCGCCAACACCCTCTCTCTCTTGAACAAATATCCCATACATCCAAATCCAATTCATCTTCACCAATCTTCTGCTTCTTCCTCTTCTTCCCATAATAGTGATCTTCTCATCATGCAAATGCAGCACCCGCAGATCCACCCTTGCTTGCTTACAGATGACAACCACATTTGCAAGACCCCGCCGCCGCCGGACACAAGAGGCTCTTACCGGAGAAAAAGAAACATAGAGACATGGAAGAAGGAGACGGAGAATGAAAGAGAGGAGGATGGGCATCAATGGAGGAAGTATGGACAGAAGGCAATCCAGAATGAGAAATACACAAGGAACTACTTCCGATGCACTCACAAGTACGAACAGGGATGCCGAGCAACCAAGCAAGTTCAGAGAATTCAAGAGAAGCCTCCGTTGTACAGGGCCACCTATCATGGCCGCCACACCTGCACCAACACAGACACTACTAATAACCACGTACTCATCATGGAGGAATTAGATTACCCTACTTCCTCCTCCTCCTCCATATTCCTCAGCTTTGACAACTCCTTCCCTAATCCACCAACCAATCCCTTTCTCTCATCATCTTCTTCTTCGCTTTTCCCCTCAACAGCACCGCCGCTACCTGCGATGATGATAGTGGAAGAGGATCGGCAAGTTCTTCCCTCAACTACTTCAACTCACCCCGTTTTGGATGATTCGTCAAGGCATCATGTGGTCCCTATACTATCATCGTCAGAAAATAATAATATTTGCTGGGATGATATGATGATGATGGCTGCCATGTCTCAAGTGTTATACGATTCTGTTGATGAGGGATGA 996 0.4568 MKMIMEDDDIVSREDGIKAIIEEELVRGREFADQLRQLIVINKEDDDSADHQWLLSNVLTSFANTLSLLNKYPIHPNPIHLHQSSASSSSSHNSDLLIMQMQHPQIHPCLLTDDNHICKTPPPPDTRGSYRRKRNIETWKKETENEREEDGHQWRKYGQKAIQNEKYTRNYFRCTHKYEQGCRATKQVQRIQEKPPLYRATYHGRHTCTNTDTTNNHVLIMEELDYPTSSSSSIFLSFDNSFPNPPTNPFLSSSSSSLFPSTAPPLPAMMIVEEDRQVLPSTTSTHPVLDDSSRHHVVPILSSSENNNICWDDMMMMAAMSQVLYDSVDEG 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00616 331 SMART WRKY_cls 148 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip02g00616 331 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 22 292 IPR044810 GO:0003700
Aip02g00616 331 Gene3D WRKY domain 134 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip02g00616 331 ProSiteProfiles WRKY domain profile. 143 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip02g00616 331 Pfam WRKY DNA -binding domain 149 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip02g00616 331 PANTHER WRKY TRANSCRIPTION FACTOR 70-RELATED 22 292 - -
Aip02g00616 331 SUPERFAMILY WRKY DNA-binding domain 145 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00616 Aip-Chr2 9280686 9282262 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00616 18 213 WRKY Transcription Factor Family AT3G56400 36.139 8.50e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip02g00616 WRKY 1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00616 - - adu:107473290 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02465 04 110730298 110735285 Aip02g00616 02 9280686 9282262 PCT