LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip02g00611	ATGAGGTTACTTACACCTTTTTCTTTCTTGTATTTCTTCATATTTTCAACAGAACTCAAAGATCCATCACTGAAGCAAGTGCTTAAAGAACAAGCTACAAAGATAATCTTCAATGCTCACAATGACATTAAGCTTTTAGAGTATAAACCTTCAACTATTGCAGCATCTGCTCTTATCTCTGCATCTCACGAACTATGTCCGCAGCAATATTCTATGCTGAGAACTTCAATTGCAACTTACATTAAACTTTTAGAGTATAAACCTTCAACTATTGCAGCATCTGCTCTTATCTCTGCATCTTGTGAACTATGTTTGCAACAATATACTATGCTGAGAGCTTCAATTGCAACTTATTCATTGACCAAGTGCATTGACCTAATGCAAGAGATGGCTATGTGGACGGAAGCGAATGAGTCAACCATTGATACAAGCTTTCTAAGCATTGAAACTCCGCTTTTAGAGTATAAACCTTTCATTATTGCAGCATCTGCTCTTATCTCTGCATCTCGCAAACTATGTCCGCAGCAATATACCATGCTGAGAGCTTCAATTGCAGCTTGTGAGTATCTAGATGAGGATTCAATGACCAAGTGCATTGACTTAATGCAAAAGATGGTTATGTGGATGGAAGCGAACGAGTCAACCATTGATACAAGCTTTCTAAGCACTAAACCTTCGGTGAGCGTGCTGGAGAGAAGCATTAAGCGGCGAAGAATCTAA	720	0.3861	MRLLTPFSFLYFFIFSTELKDPSLKQVLKEQATKIIFNAHNDIKLLEYKPSTIAASALISASHELCPQQYSMLRTSIATYIKLLEYKPSTIAASALISASCELCLQQYTMLRASIATYSLTKCIDLMQEMAMWTEANESTIDTSFLSIETPLLEYKPFIIAASALISASRKLCPQQYTMLRASIAACEYLDEDSMTKCIDLMQKMVMWMEANESTIDTSFLSTKPSVSVLERSIKRRRI	239

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip02g00611	239	PANTHER	CARBOXY-TERMINAL DOMAIN CYCLIN	149	237	-	-
	Aip02g00611	239	SUPERFAMILY	Cyclin-like	81	135	IPR036915	-
	Aip02g00611	239	Pfam	Cyclin, C-terminal domain	5	69	IPR004367	-
	Aip02g00611	239	PANTHER	CARBOXY-TERMINAL DOMAIN CYCLIN	81	151	-	-
	Aip02g00611	239	PANTHER	CARBOXY-TERMINAL DOMAIN CYCLIN	1	80	-	-
	Aip02g00611	239	SUPERFAMILY	Cyclin-like	2	68	IPR036915	-
	Aip02g00611	239	Gene3D	-	1	74	-	-
	Aip02g00611	239	Gene3D	-	142	217	-	-
	Aip02g00611	239	Gene3D	-	75	141	-	-
	Aip02g00611	239	PANTHER	CYCLINS	81	151	IPR039361	-

Showing 1 to 10 of 13 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip02g00611	Aip-Chr2	9146725	9149166	Tandem

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip02g00611	1	82	Core Cell Cycle Gene Families	AT4G03270	49.425	3.04e-15	71.6

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip02g00611	K18812		-	gmx:100799763	106.301

Showing 1 to 1 of 1 entries