Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00606 ATGTTGGACTACGAATGGGGGAACCCATCCATAATGCTCACCGGGAACGAAGACGGCGCAGCGCCACCGCCCTCCGACCAAACTCACCGCCAAATCTTCGACCACTACGCCTCTCACGCCCTACTGCCCGACCACTTCCTGCATGGGCCCGGCGCAACAACCGCAGCTAGCAATAACGCACACAACCCCACCACCACCATCGACCTCTCTCATCATCACTTCAGCCCGCAACAAACCCACCACCACGTCCCCCACAGCTTCTTCGACCCACGGGCCTTCCATGCGGCCTCCTCCACCCACTACCCACCGCCACATCCCCAACCCCCGCCTCCCCCATCCATGCTTTCCCTTGACCCGTTACCCCACCACGCCCACTGCGGGCCCGGCCATGGGCTCATGCTGGTGCCGAAATCTGAGGATGTCGGTCGGCCCATGGACTTCGTGGGCTCTCGAATTGGGCTGAACCTGGGAGGGCGCACCTACTTCTCGTCCTCGGAGGATGACTTCGTCAGCAGGCTGTACCGCAGGTCTCGGCCCGCCGAACCGGGGTCGACGGCGTCCTCTAACTCCCCTCGGTGCCAGGCGGAGGGGTGCAATGCTGATCTGTCTCAGGCGAAGCACTACCACCGCCGCCACAAAGTGTGCGAGTTCCACTCTAAGGCCTCCACCGTCATCGCCGCCGGGTTGACTCAGCGATTCTGCCAACAATGCAGCAGGTTGTTCCATCTTCTCTCTGAGTTCGATAACGGAAAACGTAGCTGCAGGAAGAGACTGGCAGATCATAATCGTCGCAGAAGAAAAACTCAGCAGCCACCAGCACAAGACATCCACAAATCTCAGCCTGCTACTAATTTGGATAACGTTGCAAGGTCCCCACCGGAGTCCGGAGCTCAGTCATCTTCGTCCGTAACGGTGGCCGTGTCGCCACCTGATTACTTCCGGCAAAGGCCGTACCAAACCGGAAGCCCATCAACGACTTCAAGTTCACTGTTTTTCTCAAGCGGGCAGTAG 1011 0.5955 MLDYEWGNPSIMLTGNEDGAAPPPSDQTHRQIFDHYASHALLPDHFLHGPGATTAASNNAHNPTTTIDLSHHHFSPQQTHHHVPHSFFDPRAFHAASSTHYPPPHPQPPPPPSMLSLDPLPHHAHCGPGHGLMLVPKSEDVGRPMDFVGSRIGLNLGGRTYFSSSEDDFVSRLYRRSRPAEPGSTASSNSPRCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVIAAGLTQRFCQQCSRLFHLLSEFDNGKRSCRKRLADHNRRRRKTQQPPAQDIHKSQPATNLDNVARSPPESGAQSSSSVTVAVSPPDYFRQRPYQTGSPSTTSSSLFFSSGQ 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00606 336 SUPERFAMILY SBT domain 191 270 IPR036893 GO:0003677|GO:0005634
Aip02g00606 336 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 8 82 319 - -
Aip02g00606 336 MobiDBLite consensus disorder prediction 273 308 - -
Aip02g00606 336 ProSiteProfiles Zinc finger SBP-type profile. 190 268 IPR004333 GO:0003677
Aip02g00606 336 MobiDBLite consensus disorder prediction 257 336 - -
Aip02g00606 336 MobiDBLite consensus disorder prediction 1 26 - -
Aip02g00606 336 Gene3D - 183 255 IPR036893 GO:0003677|GO:0005634
Aip02g00606 336 MobiDBLite consensus disorder prediction 315 336 - -
Aip02g00606 336 MobiDBLite consensus disorder prediction 95 122 - -
Aip02g00606 336 Pfam SBP domain 193 267 IPR004333 GO:0003677
Aip02g00606 336 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 82 319 IPR044817 GO:0003677
Aip02g00606 336 MobiDBLite consensus disorder prediction 101 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00606 Aip-Chr2 9053719 9055719 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00606 1 240 SBP-box Gene Family AT1G02065 46.565 5.68e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Aip02g00606 SBP 4.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00606 - - adu:107473166 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00606 02 9053719 9055719 Aip04g02201 04 102341453 102342289 PCT