Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00599 ATGGAAGCCTCATTATCCCTCTCAATCTCTAATAATCTTCAAAATCAAAACATGGAAACCAGTAGTAATGATGCTCCTTCTCCTCATCAAGTAGAACACAACAACACAAGCACGACGAGTTCATCAACAGAAGAAGAAGAACCATTAGGAGGAAAATCAAAGAAGAAGAGGGAGAGAAGTAGTAGCAGTAGTAGTTGTAGTAGGGAGAGTGAGAAGCACGCGACATACAGGGGCGTGAGGATGAGAAACTGGGGGAAGTGGGTGTCAGAAATAAGGCAACCGAAAAAGAAAAACAGAATATGGTTAGGCACGTATCCAACTGCCGAAATGGCGGCAAGAGCGCATGACGTGGCAGCCTTGGCGATCAAAGGTGATTCCGCATTCCTCAACTTCCCTCAACTTGCATCTCTTCTTCCACGCCCTGCAACCACTTCGCCTAAAGATATCCAGGTTGCTGCTGCCATCGCCGCCAATGACACCGACTTTCAGTTTCATCAACCACCACCTTCTTCTTCTTCCTCCTCTTCATCTTCTTCTTCATCACAAGAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAATCATTCAAAATAG 756 0.3399 MEASLSLSISNNLQNQNMETSSNDAPSPHQVEHNNTSTTSSSTEEEEPLGGKSKKKRERSSSSSSCSRESEKHATYRGVRMRNWGKWVSEIRQPKKKNRIWLGTYPTAEMAARAHDVAALAIKGDSAFLNFPQLASLLPRPATTSPKDIQVAAAIAANDTDFQFHQPPPSSSSSSSSSSSSQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNHSK 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00599 251 Pfam AP2 domain 76 124 IPR001471 GO:0003700|GO:0006355
Aip02g00599 251 MobiDBLite consensus disorder prediction 1 74 - -
Aip02g00599 251 Gene3D AP2/ERF domain 75 133 IPR036955 GO:0003700|GO:0006355
Aip02g00599 251 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 16 181 - -
Aip02g00599 251 SUPERFAMILY DNA-binding domain 75 133 IPR016177 GO:0003677
Aip02g00599 251 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF043 16 181 - -
Aip02g00599 251 SMART rav1_2 75 138 IPR001471 GO:0003700|GO:0006355
Aip02g00599 251 MobiDBLite consensus disorder prediction 1 46 - -
Aip02g00599 251 MobiDBLite consensus disorder prediction 158 231 - -
Aip02g00599 251 MobiDBLite consensus disorder prediction 163 185 - -
Aip02g00599 251 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Aip02g00599 251 PRINTS Ethylene responsive element binding protein signature 98 114 IPR001471 GO:0003700|GO:0006355
Aip02g00599 251 CDD AP2 76 132 IPR001471 GO:0003700|GO:0006355
Aip02g00599 251 ProSiteProfiles AP2/ERF domain profile. 75 132 IPR001471 GO:0003700|GO:0006355
Aip02g00599 251 MobiDBLite consensus disorder prediction 47 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00599 Aip-Chr2 8935147 8935989 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00599 71 157 AP2-EREBP Transcription Factor Family AT2G44940 80.460 2.37e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aip02g00599 AP2 6.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00599 - - ahf:112726739 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00599 02 8935147 8935989 Aip02g00599 02 8935147 8935989 ECH