Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00598 ATGTTTGGGCGTGGAGCAAGAAGGAGCAGCAGCGATAACACCAAATATTATGATGTTCTCGGTGTTTCAAAAAACGCTAATGAAGATGAAATCAAGAAGGCCTATAGAAAGGCTGCAATGAAGAATCATCCAGATAAAGGTGGAGATCCTGAGAAGTTCAAGGAGCTAGGTCAAGCTTATGAAGTTTTAAGTGATCCGGAGAAGAGAGAACTGTATGATCAATATGGTGAAGATGCCCTTAAGGAAGGAATGGGAGGAGGAGGAAGCTCATTCCATAACCCATTTGATATTTTTGAATCATTTTTTGGTGGAGCTAGCTTTGGTGGTGGTAGCTCACGAGGTAGAAGACAAAAGCATGGTGAAGATGTTGTGCATTCTCTAAAGGTTTCCTTGGAGGATGTTTATAATGGCACAACAAAGAAACTATCTCTTTCTAGAAATGTATTGTGCCCGAAATGTAAAGGGAAGGGTTCCAAAAGTGGAAATGCTGGTAGGTGTTATGGATGCCAAGGCACTGGTATGAAGATTACAACAAGGCAGATTGGACTGGGCATGATTCAACAAATGCAACACATCTGTCCTGAATGCAGGGGAAGTGGCGAGGTCATTAGCGAGAGAGATAGATGCACTCAGTGCAAGGGAAACAAGGTCTCCCAAGAAAAGAAGGTGCTTGAGGTGCATGTTGAGAAGGGGATGCAACAGGGCCAGAAGATTGTGTTTGAAGGTCAAGCTGATGAAGCGCCTGACACAATCACAGGAGACATTGTGTTTGTCTTACAAGTGAAGGAGCACCCACGATTCAAACGAGAGCATGATGACCTCTATATTGAGCACAGTCTCAACTTGACCGAGGCTCTTTGTGGCTTCCAGTTTGCTGTCACCCATCTTGATGGGAGACAACTATTGATCAAATCCAACCCTGGAGAAGTCATCAAACCAGGCCAACAAAAAGCCATAAATGATGAGGGAATGCCACAACACAATAGGCCCTTCATGAAGGGTCGTCTTTACATCAAGTTCAATGTGGATTTTCCAGACTCAGGGTTCCTTTCCCCTGACCAATGCCGATTATTAGAGACGATATTACCTCAGAAATCCAGCAAGCAGTTGACAGATATGGAGCTGGATGAGTGTGAGGAGACCACGTTACATGATGTCAACATGAAGGATGAGATGAGAAGAAAGCAGCAACAGCACTACCACGAGGCATATGATGATGATGATGATGAGCAATCCATGCCTCGAGTGCAATGTGCTCAACAGTAG 1266 0.4431 MFGRGARRSSSDNTKYYDVLGVSKNANEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRELYDQYGEDALKEGMGGGGSSFHNPFDIFESFFGGASFGGGSSRGRRQKHGEDVVHSLKVSLEDVYNGTTKKLSLSRNVLCPKCKGKGSKSGNAGRCYGCQGTGMKITTRQIGLGMIQQMQHICPECRGSGEVISERDRCTQCKGNKVSQEKKVLEVHVEKGMQQGQKIVFEGQADEAPDTITGDIVFVLQVKEHPRFKREHDDLYIEHSLNLTEALCGFQFAVTHLDGRQLLIKSNPGEVIKPGQQKAINDEGMPQHNRPFMKGRLYIKFNVDFPDSGFLSPDQCRLLETILPQKSSKQLTDMELDECEETTLHDVNMKDEMRRKQQQHYHEAYDDDDDEQSMPRVQCAQQ 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00598 421 MobiDBLite consensus disorder prediction 387 421 - -
Aip02g00598 421 PRINTS DnaJ domain signature 17 35 IPR001623 -
Aip02g00598 421 PRINTS DnaJ domain signature 48 68 IPR001623 -
Aip02g00598 421 PRINTS DnaJ domain signature 68 87 IPR001623 -
Aip02g00598 421 SUPERFAMILY Chaperone J-domain 11 110 IPR036869 -
Aip02g00598 421 Hamap Chaperone protein DnaJ [dnaJ]. 12 391 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Aip02g00598 421 Gene3D - 150 216 - -
Aip02g00598 421 PANTHER CHAPERONE PROTEIN DNAJ A6 9 421 - -
Aip02g00598 421 SMART dnaj_3 14 68 IPR001623 -
Aip02g00598 421 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 147 218 IPR036410 -
Aip02g00598 421 Gene3D - 113 264 - -
Aip02g00598 421 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 9 421 IPR044713 GO:0006457|GO:0030544
Aip02g00598 421 ProSiteProfiles Zinc finger CR-type profile. 137 221 IPR001305 GO:0031072|GO:0051082
Aip02g00598 421 ProSitePatterns Nt-dnaJ domain signature. 53 72 IPR018253 -
Aip02g00598 421 Pfam DnaJ domain 15 73 IPR001623 -
Aip02g00598 421 Gene3D - 265 346 - -
Aip02g00598 421 CDD DnaJ 16 65 IPR001623 -
Aip02g00598 421 SUPERFAMILY HSP40/DnaJ peptide-binding domain 266 347 IPR008971 GO:0006457|GO:0051082
Aip02g00598 421 ProSiteProfiles dnaJ domain profile. 15 76 IPR001623 -
Aip02g00598 421 Gene3D DnaJ domain 12 112 IPR036869 -
Aip02g00598 421 MobiDBLite consensus disorder prediction 387 413 - -
Aip02g00598 421 CDD DnaJ_C 121 347 - -
Aip02g00598 421 Pfam DnaJ central domain 150 216 IPR001305 GO:0031072|GO:0051082
Aip02g00598 421 CDD DnaJ_zf 150 216 IPR001305 GO:0031072|GO:0051082
Aip02g00598 421 Pfam DnaJ C terminal domain 124 345 IPR002939 -
Aip02g00598 421 SUPERFAMILY HSP40/DnaJ peptide-binding domain 121 265 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00598 Aip-Chr2 8916587 8918981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00598 6 75 C2H2 Transcription Factor Family AT1G74250 44.304 3.95e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00598 K09503 - gmx:100800590 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00598 02 8916587 8918981 Aip02g00598 02 8916587 8918981 ECH