LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip02g00586	ATGCTCGACGTAGATTCTCGCGTCGACTCCACCATGTCCGTTGAGCTCGACCAGCAAGCATCCCTAACCAATTCATTTCAGAAAGCATACATTCGTGTTCCTTATCTCAGCGCCATTGATTTCTCAGCCACAAATGATGTCATTGAGAGAGAGCTCTACAAGCTCATGACTATGCAAACTAGAGTCTTTGTTGTTCACATGACATTCCGTCTTGCCTCTCGTCTCTTCTCCATTGCCAAAGACATTGGAATGATGGATGAAGGTTATGTTTGGATTGTGACTGCTGGAATTGCTAATCTTTTTAACTCATTGGACTCTTCGGTTATGGAATCCATGGAAGGTGTGTTGGGTGTTAGGCCTTATATTCCAAGAACAAAACAGCTTCTTGATTTTAGAGCTCGATGGAAAAGAGAGTTCTTAAGAGACAATCCAACACTTGTTGATGTTAATTTGGATGTTTTTGGAATATGGGCCTATGATGCTACTGCTGCATTAGCCATGGCAGTTGAGAAGCTTGACAACACTGTTTTCGGCTTCACTAATGTGAGCAACAACTCCAACAACGTGACTGATCTTGAAAACTTAGGCGTTTCACGAGACGGCGAGAAGCTGAGGGAAGCTTTATCAAATGTTAGATTCAAAGGTGTTGGTGGTGAGTTCAAAGTAGTGGGTGGTGGGAAGTTAGAAACATCACCATTTGAGATAGTTAATGTGATTGGTAATAGTGAAAGAAACATTGGATTTTGGACACCACAGAAGGGACTAATCAGAGACATGGATGCAAATAATTCAACTTCTAAGGAGAATCTAAGAGCAATTCTATGGCCAGGGGACTCTTACTCTGTTCCAAAGGGATGGGAAATTCCCACAAATGGTAACAAGTTAAAGATAGGAGTCCCAGTAAAAGATAATGGCTTCTCTGAATTTGTGAAAGTAATCCATGATCCTATTACCAATTCTACAAAGGTCACCGGGTTCTGCATTGATGTGTTTAATGCTGTGGTAGAAGCGTTGCCTTATGCCCTTCCATTTGAATTCATTCCATTTGAAAATTCCAACAATGAGATGGCAGGAACATATGATGATTTGATCACCCAAGTTTATTATGAAAAGTTTGATGCTGTGGTGGGGGACACAACAATTACGGGAAACAGGTCCAAGTATGTCGATTTCACATTGCCGTACACAGAATCTGGTGTGACTATGGTTGTTCCAGTAAGAGACAATAGAAAGAAGAATGCATGGGCCTTCTTGAAGCCATTGACATGGGACCTTTGGGTAACAATATTTTTTACCTTTGTTTTCATAGGATTTGTTGTTTGGGTACTTGAACACCGAATCAATGAATGTTTTAGAGGGCCTATGCCTTATCAAATTGGCACTAGCTTGTGGTTTTCCTTCTCAACCATGGTATTTTCTCATCAAGAGAGAGTGGAGAGCAATTATGGAAGATTTGTGGTGATAGTATGGGTTTTTGTAGTTCAAATTCTGGTTCAAAGCTACACTGCAAGTCTTACCTCTCTCTTAACAGTTGAACGACTACGCCCAGCATTTACAGATGTTCATCAACTCTTAAAGAATCGGTTGAATGTTGGTTATTTGGAAGGTTCTTTTGTTCATGAAATCTTGAAGGATTTGGGGTTCCATGAAAACCAGCTTAAGATATATAAATCTGCAGAAGAATGCAATGATCTCTTCACAAAAGGAAGTGCTAATAATGGCATCGATGCGGCTTTTGACGAAGTCCCTTACGTGATGCACCTTCTTGGAACTTATTGCTCCAAGTATGCCATGGTTGAGCCAAGATTTAAAACTGGTGGCTTTGGCTTTGTGTTTCCAAAAGGGTCACCTCTAGTGGGAGACATATCACGTGCAATCTTGAATGTGAGTGAAGGAGGCAAAATGAGAAGAATTGAGAATGCATGGTTGAATGGAAGCAGTTGTCAAGATTCAAATAACAATGCAGCACAAGTATCTTCTACAAGCCTAGGACTAGAAAGCTTCTGGGGTCTGTTCTTGGTTGTAGTAGTTCTATAA	2037	0.407	MLDVDSRVDSTMSVELDQQASLTNSFQKAYIRVPYLSAIDFSATNDVIERELYKLMTMQTRVFVVHMTFRLASRLFSIAKDIGMMDEGYVWIVTAGIANLFNSLDSSVMESMEGVLGVRPYIPRTKQLLDFRARWKREFLRDNPTLVDVNLDVFGIWAYDATAALAMAVEKLDNTVFGFTNVSNNSNNVTDLENLGVSRDGEKLREALSNVRFKGVGGEFKVVGGGKLETSPFEIVNVIGNSERNIGFWTPQKGLIRDMDANNSTSKENLRAILWPGDSYSVPKGWEIPTNGNKLKIGVPVKDNGFSEFVKVIHDPITNSTKVTGFCIDVFNAVVEALPYALPFEFIPFENSNNEMAGTYDDLITQVYYEKFDAVVGDTTITGNRSKYVDFTLPYTESGVTMVVPVRDNRKKNAWAFLKPLTWDLWVTIFFTFVFIGFVVWVLEHRINECFRGPMPYQIGTSLWFSFSTMVFSHQERVESNYGRFVVIVWVFVVQILVQSYTASLTSLLTVERLRPAFTDVHQLLKNRLNVGYLEGSFVHEILKDLGFHENQLKIYKSAEECNDLFTKGSANNGIDAAFDEVPYVMHLLGTYCSKYAMVEPRFKTGGFGFVFPKGSPLVGDISRAILNVSEGGKMRRIENAWLNGSSCQDSNNNAAQVSSTSLGLESFWGLFLVVVVL	678

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip02g00586	678	Gene3D	-	414	553	-	-
	Aip02g00586	678	Gene3D	-	11	150	-	-
	Aip02g00586	678	Gene3D	-	295	413	-	-
	Aip02g00586	678	Pfam	Receptor family ligand binding region	22	240	IPR001828	-
	Aip02g00586	678	SUPERFAMILY	Periplasmic binding protein-like II	271	645	-	-
	Aip02g00586	678	Gene3D	-	198	294	-	-
	Aip02g00586	678	CDD	GluR_Plant	293	643	-	-
	Aip02g00586	678	Gene3D	-	592	650	-	-
	Aip02g00586	678	Pfam	Ligand-gated ion channel	645	676	IPR001320	GO:0015276\|GO:0016020
	Aip02g00586	678	PANTHER	GLUTAMATE RECEPTOR 2.9	20	677	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip02g00586	Aip-Chr2	8779607	8786008	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip02g00586	37	675	Ion Channels	AT2G29110	54.432	0.0	663

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip02g00586	K05387		-	pvy:116134990	800.816

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