Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00575 ATGATGCAAGGGGAAGGAGAAGTGGAAAACATTCCGCACTGTACGATGTTGTTCCTTCACCGCCGTCTATGCACCACCGCCACCAGAACAAAGGTTCCTTCAAAGTACAAGAACCTTGCTCTCTCTCAAGCCCAGAAGATCCTCACTGATTACCTTCATTCCACAAGGTCCATCCCTTATGCCTTTGCTGATCAGATTGCTGCTAATTCTCACACTTCTATCTCTAACCTCATTGCAAAGGTGGGATTTTCAGCTCCGTCTTTCTCCCACACCCTCAACAAGTTCCTCAGGTGTAATACTGATGAGTTGAAGGGCAGGCTGTGTGTGCTGAAAAGTTATGGTTTTTGCAGTGTTCAGGTCATTGGGATATGTTTGGCTTTCCCTTTTGTTTTTGGTGAGCAGGGAGGAGTGTTGGAAGCTGAGATTGATGGGCTACTTGCTGATCTCAGGTTGGTTTTTCTGGATTTTGATTTGGCAGGGTTTGTTGAGGGGAATGCAGATTCTTGGTACGAGGTATGTAGGAAAATTCGGGTTTTTTACAATTTGAATAGTGAGAAGGGTAAGATGGGGGAACTCATTGGAAGGTATAAGAATGTGATTCTTGAGCATGGAGAAGAGGAGTTGATGCAGAAAGCTGAGTATTTTTCTAGGTTTGGTGTCAAGAAGGAGGAAGTAGCTCGATTGATCCTACATGACTCGGAATTGTTGAATTTTGATTTCGAAACGCCGGTGATCAATGTATTGAAGCTGTTGAAACACTTTGGCATGAGCTCCAAGGATCTCGAGGATGTGCAGCGAAACTATGCTCATGCATTGGGAACAATAAAAATGGTTAATTTGCCTAATGTAATGAGGGCTTTGGGTTTAAGTAAGTGGTTCTTTAATAGGATAAAGGACGGGACGCATCAACTCTTACTGACTTATGTCACAAGCTTTCCCAATGAAGACCAAGATAAAGGATATCAAGATGGTTTAAAGGCGATTCGTGCTTCGAGAACCCCAGTTCACACCATGAATAAACTGAATTTCTTGCATGCCTTAGGCTTTGGAGAAACTGCTTTGACCATGGCTATCCTAACTTACTTGAATGGGACTAGCAGCGAGTTACAGGAACGATTCGATTGCCTTCTTCATTTAGGGATTGAATTCTCAAAGCTCTCAAAGATAGTTGCAATTCGACCTAAGGTTCTAAGCCAACACCCGAAAATCATTGAGAAAAAGATTAAGTTCCTCTATGAGGAAATGGGATCCTCTGTGGAGCTTTTGGACACTTTTCCAGCATTCTTATGTTTTGACTTGGAAAAGCGCATTAAACCTAGGTTCAGATTCTATATGTGGATGATAGAAAAGGGTTATTGTGCCAAAAACTTCTCTATAGCAACCATGATTGCGACCAGCGACAAGAACTTTGTTCCTCATGCTTTTCGTATCCACCCAGCTGCTCCGAAACATTGGTTTGAGCAATTCTATCTCCGCAAATTGCCGGAATGA 1491 0.4272 MMQGEGEVENIPHCTMLFLHRRLCTTATRTKVPSKYKNLALSQAQKILTDYLHSTRSIPYAFADQIAANSHTSISNLIAKVGFSAPSFSHTLNKFLRCNTDELKGRLCVLKSYGFCSVQVIGICLAFPFVFGEQGGVLEAEIDGLLADLRLVFLDFDLAGFVEGNADSWYEVCRKIRVFYNLNSEKGKMGELIGRYKNVILEHGEEELMQKAEYFSRFGVKKEEVARLILHDSELLNFDFETPVINVLKLLKHFGMSSKDLEDVQRNYAHALGTIKMVNLPNVMRALGLSKWFFNRIKDGTHQLLLTYVTSFPNEDQDKGYQDGLKAIRASRTPVHTMNKLNFLHALGFGETALTMAILTYLNGTSSELQERFDCLLHLGIEFSKLSKIVAIRPKVLSQHPKIIEKKIKFLYEEMGSSVELLDTFPAFLCFDLEKRIKPRFRFYMWMIEKGYCAKNFSIATMIATSDKNFVPHAFRIHPAAPKHWFEQFYLRKLPE 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00575 496 PANTHER CGI-12 PROTEIN-RELATED 104 489 IPR003690 GO:0003690|GO:0006355
Aip02g00575 496 PANTHER CGI-12 PROTEIN-RELATED 25 97 IPR003690 GO:0003690|GO:0006355
Aip02g00575 496 SMART mt_12 190 221 IPR003690 GO:0003690|GO:0006355
Aip02g00575 496 SMART mt_12 419 451 IPR003690 GO:0003690|GO:0006355
Aip02g00575 496 SMART mt_12 226 257 IPR003690 GO:0003690|GO:0006355
Aip02g00575 496 SMART mt_12 387 418 IPR003690 GO:0003690|GO:0006355
Aip02g00575 496 Pfam mTERF 366 470 IPR003690 GO:0003690|GO:0006355
Aip02g00575 496 Pfam mTERF 172 273 IPR003690 GO:0003690|GO:0006355
Aip02g00575 496 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF18, MITOCHONDRIAL 25 97 - -
Aip02g00575 496 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF18, MITOCHONDRIAL 104 489 - -
Aip02g00575 496 Gene3D Transcription termination factor 3, mitochondrial 165 307 IPR038538 -
Aip02g00575 496 Gene3D Transcription termination factor 3, mitochondrial 325 489 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00575 Aip-Chr2 8612484 8614175 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aip02g00575 mTERF 1.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00575 - - adu:107473184 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00575 02 8612484 8614175 Aip02g00575 02 8612484 8614175 ECH