Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00559 ATGGCAACTATTCCTTCTGCGATCCGCATAGCTTCCATCAACAACACTGCAATGTCGACAATGGCTGCAATTGCTAGCTTTCCAGCCACAATAAAGTTAGATGACGACAATTTCAAGGTTTGGAAACGGCAAGCACTAACGTGTGTCAAAGCTAATCGACTTCAAAATCATCTCACCAGAAACACAATTCCACAAATGTTCAACACTGAAGCAGATCGAGAACAAGGTAAAGTGTCTCAAGAATTCGAAAATTGGGAACAATATGATGAATGTCTTGTAGCGTGGATGCTCTCCTCCATGAACAGCAACTTTGTAAACAAGCCTAACAGGCTAGAATCTCCGCCTCAGCCTTACTGTCAGTCTCTGCCTCTGCCTCAGCCTCAGCTAGAATGTCCTCCACCTCAGCCTAGCTCCCAGTCTCTGCCTCTGCCTCTGCCTCAGCTAGGATCTCCGCTTCAGTCTCAGCATCAATCCAAGTCACAGACGGATATAAGCAAGATGACAGAGCAGTTTTTCAATGACACTTGGGGTTATCAACCACCGTTAGAGATGATTGCCGTAGTGGGTGGTCATCAACAACATCAGGTCTGGACTTGGGAGGAGAACAAAGCCTTTGAGTCGGTTATCGCCAATTGTTTCCAGGATGCTATACACAATCACTGGAAAACCGTGGCTGCTCGCCTCCCTGGAAAGACTCCGGCACAGCTGCAAGAGCGATTCTTGAAACTGATGACCGACGTTAATGCTATCAAAAATGGTAATCCTGAGAACATGAACATCATGCTACCTGTGTCTGCTACCCCATTGGAACACAGCCTTCTCTCCATTCCCGTCGTCAATGCAACACCACCACTTCCACCACCTCATTGGACTCACCATCAGCATCACAGGTTGCTCCTCTAA 903 0.4718 MATIPSAIRIASINNTAMSTMAAIASFPATIKLDDDNFKVWKRQALTCVKANRLQNHLTRNTIPQMFNTEADREQGKVSQEFENWEQYDECLVAWMLSSMNSNFVNKPNRLESPPQPYCQSLPLPQPQLECPPPQPSSQSLPLPLPQLGSPLQSQHQSKSQTDISKMTEQFFNDTWGYQPPLEMIAVVGGHQQHQVWTWEENKAFESVIANCFQDAIHNHWKTVAARLPGKTPAQLQERFLKLMTDVNAIKNGNPENMNIMLPVSATPLEHSLLSIPVVNATPPLPPPHWTHHQHHRLLL 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00559 300 ProSiteProfiles Myb-like domain profile. 197 244 IPR001005 -
Aip02g00559 300 Gene3D - 190 256 - -
Aip02g00559 300 MobiDBLite consensus disorder prediction 142 163 - -
Aip02g00559 300 MobiDBLite consensus disorder prediction 107 163 - -
Aip02g00559 300 CDD SANT 197 244 IPR001005 -
Aip02g00559 300 SUPERFAMILY Homeodomain-like 189 255 IPR009057 -
Aip02g00559 300 Pfam Myb-like DNA-binding domain 195 243 IPR001005 -
Aip02g00559 300 SMART sant 193 246 IPR001005 -
Aip02g00559 300 MobiDBLite consensus disorder prediction 118 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00559 Aip-Chr2 8293323 8294587 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip02g00559 Myb_DNA-binding 4.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00559 - - aip:110269155 221.09