Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00557 ATGGACTCGGTCCCTCAACTGATCAAATGGCTATTTGCTCGCAAAACCTCTGTTAAATTGTCTTATGAAATTTTTCTGGAAGCTACCAAGCATTCTCAGCCTCAGCTCCAGCCGAATACAACGAACATTGAAGAGGAATGTGCTATTGAAGTCGGTGTTAATCAACCACCTGGGCTAGAATATCCGCCTCAGCCTTACGGTCAGTCTCTGCCTCTGCCTCTGCCTCAGCTAGAATGTCCACCTCAGCCTAGCTCCCAGTCTCTGCCTCTGCCTCTGCCTCAGCTAGAATCTCTGCTTCAATCTCAGCATCAATCCAAGTCGCAGACGGATATAAGCAAGATGACAGAGCAGTTTTTCAATGACACTTGGGGTTATCAACCACCGTTAGAGATGATTGCCGCAGTGGGTGGTCATCAACCACTTCAATCTCAACCGCAACCTCAGGTCTGGACTTGGGAGGAGAACAAAGCCTTTGAGTCGGTTATCGCCAATTGTTTCCAGGATGCTATACACAATAACTGGAAAACCGTGGCTGCTCGCCTCCCTGGAAAGACTCCGGCACAGCTGCAAGAGCGATTCTTGAAACTGATGACCGACGTTAATGCTATCAAAAACGGTAATCCTGAGAACATGAACATCATGATACCTGTGCCTGCTACCCCATTGGAACACAGCCTTCTCTCCATTCCCGTCGTCAATGCAACACCACCACCTCCACCGCCTCATTGGACTCACCATCAGCATCACAGGATGGAGGCATTGATGCCAGCGGCAGACATGGCAGTGCCAATGCATATTACCTTACTGTCATCATCAATGTCAGGTGCAAGAAGAGAACAAAACCAACATGCCAACAGCAACATAATCCAACATGAACCTTTACATGCGGCTTCTAGTAACAACAATAAACGGCAACAAACAATTCATTGGACTTTACAAGAACACAACTCTCTTGTTCTGATGGCAATGCCGAAGGAGTGGTGGGCTAGGTTCTATCTAAGGTCTCGATGGCTTTGTCGAAGAGATTTTAGGTGGGAACAAGGCACAAAAGATTCAGGACTAGTCGTGGTTAAGGATTTTCATGGTGTGTCTCAAAATCATGTTGGTAACCGCAGGGGTAGGAAACCAAATGGTTTGGGAAAACATGCTGTCAAGGATTCCAATGGCGATGGCAATGCCTATGTTGTGGAGGTTTCTAAGGCACAAAACAATGATGGTAAATATAGCGGAAAGCGCAGGGGTGGGAAACCAAAAGAATTGAGAAATGATGCAGTTAAGGACTCTAATGGCAGCTGCAATGGCAGGGCTTCAGAGGCAAAGGAGAATGATGGTGAGACACCACAAAAGAATGATCACATTCACCCTCCATCTGGCATAGAAATAAAGGTAAAGGAGGAGATTGAAGAGGATGATGACGATGCACTCTGCAAAAGAAGGCAAAAGGTTCCAAGTTTGAATTTGGAACATTATTGGCATGATGATAAAGCCAATGCAACGAAATACACAAAGTACAGAGAAAAACTCATGCAAGAGCTGGAGAAGCCTTACTGTGAGGAAGAGTATAAGAAGCTTTTTAAATATATGAAACATAGAAAGCTAGTCGAATACCATAAAGAGCATCGCAGCGGCCCTAGGACCTGTAAGAGAAATTATCTTGGGAAATCTCTTCTTAATCATCATGTTGGTCTGAACAAAAAACTAAAATCAGTTAGTGGTGATTATCCTAAACGTCTGACCCTCTTACGTGGATTTGTTTTTTGGTTGACGggagatatgcttaatcaCGTATTAATGAGAATCATTTCTTCCTCATTAGATGTTTCGAAAGTTCGTAAACTAAAAATGCAAGGAGATAATGATGGATGGGGCAAAGATATGTCACTTAATGGGAATAGTTTATCAATTAGGGGATTTGAATCTGTGGTGGAGTATGCATTGAAGGCAATGATCATGCACCATCTAACTTCAGGTTGTTCATCTGCTATATACTTGCAAGGCAATTATTTACCCAAATCTTTGCAAAAACTCACAATCAGGCATTGCAGAAAAATGGAATTACTCCAGCAACAACACGAGTATGACTTGGTAGAGTTACAAATAGAATACAGTTGCGACTCACTGACCTCGTTGTCATTGGATGCCTTTCCCAATCTCAAGAATCTAGATGTATCATGGTGTAAGAATCTGGAATCAGTTTCAAAGTCAGAGCCACCACACACTGTCCTTCAACGTCTCAGTGTTAGCTTCTGCAACAAGTTAGAGGCATTGCCACATGACATGAGTACTCTTTTCCCCAATTTACAGTCTCTTGACATACAAGGTTGCCCAAACATTTGTAGGTTGCCAGGGAGAGGTTTAAAGCCTAACTTGAACTCACTTACTGTGGGAGGTTGTGAGAAACAGTTGAGCAGTCTATGGTTGATGAGCAACTTGAGCGCCCTCACTCATCTTACCATTAATGGTTCTGATTGTGATAGTGTGAAGTCATTTCCAGATTGGGGTTCGCTGCCTCGCCTTCCATCCCTTACCACTCTACATATCAGTAAGTTTCATAATCTGGAGACATTGGAGTGCAACCAGCTTCTCCACCTCACCTCCCTCCAATGTTTACACATTCAACAGTGTTATAAGCTGAAGAATATGGCGGTAGAAAAGCTGCCTTCCTCTCTCTTTCAACTTCAAATTGTAGACTGTCCTTTGCTGGGAGGATTATGCAAGAACAAGCATCAATGA 2733 0.434 MDSVPQLIKWLFARKTSVKLSYEIFLEATKHSQPQLQPNTTNIEEECAIEVGVNQPPGLEYPPQPYGQSLPLPLPQLECPPQPSSQSLPLPLPQLESLLQSQHQSKSQTDISKMTEQFFNDTWGYQPPLEMIAAVGGHQPLQSQPQPQVWTWEENKAFESVIANCFQDAIHNNWKTVAARLPGKTPAQLQERFLKLMTDVNAIKNGNPENMNIMIPVPATPLEHSLLSIPVVNATPPPPPPHWTHHQHHRMEALMPAADMAVPMHITLLSSSMSGARREQNQHANSNIIQHEPLHAASSNNNKRQQTIHWTLQEHNSLVLMAMPKEWWARFYLRSRWLCRRDFRWEQGTKDSGLVVVKDFHGVSQNHVGNRRGRKPNGLGKHAVKDSNGDGNAYVVEVSKAQNNDGKYSGKRRGGKPKELRNDAVKDSNGSCNGRASEAKENDGETPQKNDHIHPPSGIEIKVKEEIEEDDDDALCKRRQKVPSLNLEHYWHDDKANATKYTKYREKLMQELEKPYCEEEYKKLFKYMKHRKLVEYHKEHRSGPRTCKRNYLGKSLLNHHVGLNKKLKSVSGDYPKRLTLLRGFVFWLTGDMLNHVLMRIISSSLDVSKVRKLKMQGDNDGWGKDMSLNGNSLSIRGFESVVEYALKAMIMHHLTSGCSSAIYLQGNYLPKSLQKLTIRHCRKMELLQQQHEYDLVELQIEYSCDSLTSLSLDAFPNLKNLDVSWCKNLESVSKSEPPHTVLQRLSVSFCNKLEALPHDMSTLFPNLQSLDIQGCPNICRLPGRGLKPNLNSLTVGGCEKQLSSLWLMSNLSALTHLTINGSDCDSVKSFPDWGSLPRLPSLTTLHISKFHNLETLECNQLLHLTSLQCLHIQQCYKLKNMAVEKLPSSLFQLQIVDCPLLGGLCKNKHQ 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00557 910 Gene3D Ribonuclease Inhibitor 667 785 IPR032675 -
Aip02g00557 910 Gene3D Ribonuclease Inhibitor 786 908 IPR032675 -
Aip02g00557 910 Pfam Myb-like DNA-binding domain 148 196 IPR001005 -
Aip02g00557 910 PANTHER F14J8.16 PROTEIN 271 589 - -
Aip02g00557 910 MobiDBLite consensus disorder prediction 406 425 - -
Aip02g00557 910 MobiDBLite consensus disorder prediction 58 88 - -
Aip02g00557 910 ProSiteProfiles Myb-like domain profile. 150 197 IPR001005 -
Aip02g00557 910 SUPERFAMILY Homeodomain-like 147 208 IPR009057 -
Aip02g00557 910 MobiDBLite consensus disorder prediction 365 458 - -
Aip02g00557 910 CDD SANT 150 197 IPR001005 -
Aip02g00557 910 Gene3D - 143 209 - -
Aip02g00557 910 SMART sant 146 199 IPR001005 -
Aip02g00557 910 SUPERFAMILY L domain-like 645 902 - -
Aip02g00557 910 PANTHER F14J8.16 PROTEIN 271 589 - -
Aip02g00557 910 MobiDBLite consensus disorder prediction 438 458 - -
Aip02g00557 910 MobiDBLite consensus disorder prediction 54 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00557 Aip-Chr2 8271107 8279455 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip02g00557 Myb_DNA-binding 6.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00557 - - aip:110269156 452.595