LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip02g00553	ATGAACTCTAGTGGCAGCGATGGCGGCAATAGCGGCGGAGGCGGCGGCGGAGGCGGCGGTGGAGATGGCGGTAGAGATGCCTATAGCGAGCTTAGGGTTTCTCTGAGCTCTCACTCTTCCGTTCCCTCTCTTCAGTGTTTTATTGGATTTTTAAGGAGTTTTAATTATGTGTCACTTCATTGTCTCTATCCATCCATCTTCATCCCGGTCAGCGCCTTCCACCGCCCCTTCGCCGGCGGCAACAGCCTTTTCTCGCGCCAATATGATCACTTACATCGTTTCTCTCTAGATCATCACCCACGTGGCAGTGGCATGAGCGTGGTGCGCGTTGGCGCCGGAGCTTACGCCGACGTGTACCGCGGCCGACGCCTCTCCGACGATCTAATCGTCGCACTCAAAGAAATCCACGATTACCAGTCCGCGTTTCGCGAAATTGATGCGCTTCAGATTCTCCAGGGTTCTCCAAACGTCGTCGTTTTGCACGAGTACTTTTGGCGCGAAGATGAGGACGCTGTGCTCGTGCTCGAGTACCTAAGGACGGATCTCGCAACCGTTATTGATGACGCGAAGAAGAAGAAGAATGGACTCCCCGTTGGGGAGATTAAGCGGTGGATGATGCAGATCCTATGCGGTGTTGACTCGTGTCACCGGAACATGATCGTGCATCGGGATTTGAAGCCCGGTAATCTGTTGATCGGAGATGATGGAATTCTCAAGTTGGCAGATTTTGGACAGGCAAGGATACTTGGGGAGCCAGGATTTGATACTTCTGAGGAGAACCCACAAGCTTATGAACATGATGGTTCTTCACTCCAAGCAGGGTCTGGAAATCAAGAGCAGGGAACTGTCCTTCGCGAAGAATATTTTAGAGTCTTGGATGAACTGAAAACAAAGAGATCTGCAGATGACATTGATAAGGATACAAACATTCCTGATGGAAATACCTCCTGTCTTGCAACGTGCACAACAAGTGATATAGATGATGACCCTTTGAAATCCAGCTTTACTTATGAAGCAAGGGAGGACGAAGGAGAAGAATCGGGTTGTCTCACGTCGTGCGTTGGAACTCGTTGGTTTAGGGCTCCTGAGCTCCTTTATGGATCCACAAACTATGGTTTAGAAATTGATCTATGGTCTTTGGGATGTATATTTGCAGAGCTCTTTACACTGGAGCCCTTATTTCCTGGAACAGCCGATATTGATCAGCTTAGTAGGATTATTAATGTTTTGGGCAACCTCGACGAGAAAGCATGGCCAGGTTGTTCCAAACTTCCCGATTATGGAATAATCTCATTTAGTAAGGTGGAAAACCCTCCTGGGCTTGAAGCTTGCCTGCCCAATCGCTCCCTCGACGAAGTGTCTCTAGTAAAAAAGCTGGTTTGTTATGATCCGGCCAAGAGAGCTACAGCAACGGAGCTACTCCATGACAAGTACTTTAATGAAGAACCTCTTCCTGTTCCGGTTTCAGAGTTGCATGTTCCTTTGAACAGAAAGGGAGAAGATGAAAACTCTCCGTGGCATGATTACAATTACATGGGTTCTGATTCTGACCTGGAGGACTTTGGCCCTGTGAATATCACAAAAACTGcacttcttgttggagctttagtttctggcttcgccaatgttgttcttgacaggctcatttaa	1650	0.4667	MNSSGSDGGNSGGGGGGGGGGDGGRDAYSELRVSLSSHSSVPSLQCFIGFLRSFNYVSLHCLYPSIFIPVSAFHRPFAGGNSLFSRQYDHLHRFSLDHHPRGSGMSVVRVGAGAYADVYRGRRLSDDLIVALKEIHDYQSAFREIDALQILQGSPNVVVLHEYFWREDEDAVLVLEYLRTDLATVIDDAKKKKNGLPVGEIKRWMMQILCGVDSCHRNMIVHRDLKPGNLLIGDDGILKLADFGQARILGEPGFDTSEENPQAYEHDGSSLQAGSGNQEQGTVLREEYFRVLDELKTKRSADDIDKDTNIPDGNTSCLATCTTSDIDDDPLKSSFTYEAREDEGEESGCLTSCVGTRWFRAPELLYGSTNYGLEIDLWSLGCIFAELFTLEPLFPGTADIDQLSRIINVLGNLDEKAWPGCSKLPDYGIISFSKVENPPGLEACLPNRSLDEVSLVKKLVCYDPAKRATATELLHDKYFNEEPLPVPVSELHVPLNRKGEDENSPWHDYNYMGSDSDLEDFGPVNITKTALLVGALVSGFANVVLDRLI	549

Showing 1 to 1 of 1 entries

Previous1Next

Annotation information

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Aip02g00553	549	Gene3D	Transferase(Phosphotransferase) domain 1	105	277	-	-
Aip02g00553	549	Pfam	Protein kinase domain	108	253	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Aip02g00553	549	Pfam	Protein kinase domain	347	479	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Aip02g00553	549	MobiDBLite	consensus disorder prediction	263	279	-	-
Aip02g00553	549	MobiDBLite	consensus disorder prediction	251	279	-	-
Aip02g00553	549	Gene3D	Transferase(Phosphotransferase) domain 1	318	486	-	-
Aip02g00553	549	ProSiteProfiles	Protein kinase domain profile.	104	479	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Aip02g00553	549	MobiDBLite	consensus disorder prediction	1	23	-	-
Aip02g00553	549	SUPERFAMILY	Protein kinase-like (PK-like)	109	485	IPR011009	-
Aip02g00553	549	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	220	232	IPR008271	GO:0004672\|GO:0006468

Showing 1 to 10 of 14 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip02g00553	Aip-Chr2	8206373	8220375	Transposed

Showing 1 to 1 of 1 entries

Previous1Next

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip02g00553	109	530	Core Cell Cycle Gene Families	AT4G28980	64.574	0.0	579

Showing 1 to 1 of 1 entries

Previous1Next

Transcription factors information

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_CDK-CCRK	Aip02g00553		Pkinase	1.1e-29	CL0016

Showing 1 to 1 of 1 entries

Previous1Next

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip02g00553	-		-	ahf:112726382	884.789

Showing 1 to 1 of 1 entries

Previous1Next