Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00553 ATGAACTCTAGTGGCAGCGATGGCGGCAATAGCGGCGGAGGCGGCGGCGGAGGCGGCGGTGGAGATGGCGGTAGAGATGCCTATAGCGAGCTTAGGGTTTCTCTGAGCTCTCACTCTTCCGTTCCCTCTCTTCAGTGTTTTATTGGATTTTTAAGGAGTTTTAATTATGTGTCACTTCATTGTCTCTATCCATCCATCTTCATCCCGGTCAGCGCCTTCCACCGCCCCTTCGCCGGCGGCAACAGCCTTTTCTCGCGCCAATATGATCACTTACATCGTTTCTCTCTAGATCATCACCCACGTGGCAGTGGCATGAGCGTGGTGCGCGTTGGCGCCGGAGCTTACGCCGACGTGTACCGCGGCCGACGCCTCTCCGACGATCTAATCGTCGCACTCAAAGAAATCCACGATTACCAGTCCGCGTTTCGCGAAATTGATGCGCTTCAGATTCTCCAGGGTTCTCCAAACGTCGTCGTTTTGCACGAGTACTTTTGGCGCGAAGATGAGGACGCTGTGCTCGTGCTCGAGTACCTAAGGACGGATCTCGCAACCGTTATTGATGACGCGAAGAAGAAGAAGAATGGACTCCCCGTTGGGGAGATTAAGCGGTGGATGATGCAGATCCTATGCGGTGTTGACTCGTGTCACCGGAACATGATCGTGCATCGGGATTTGAAGCCCGGTAATCTGTTGATCGGAGATGATGGAATTCTCAAGTTGGCAGATTTTGGACAGGCAAGGATACTTGGGGAGCCAGGATTTGATACTTCTGAGGAGAACCCACAAGCTTATGAACATGATGGTTCTTCACTCCAAGCAGGGTCTGGAAATCAAGAGCAGGGAACTGTCCTTCGCGAAGAATATTTTAGAGTCTTGGATGAACTGAAAACAAAGAGATCTGCAGATGACATTGATAAGGATACAAACATTCCTGATGGAAATACCTCCTGTCTTGCAACGTGCACAACAAGTGATATAGATGATGACCCTTTGAAATCCAGCTTTACTTATGAAGCAAGGGAGGACGAAGGAGAAGAATCGGGTTGTCTCACGTCGTGCGTTGGAACTCGTTGGTTTAGGGCTCCTGAGCTCCTTTATGGATCCACAAACTATGGTTTAGAAATTGATCTATGGTCTTTGGGATGTATATTTGCAGAGCTCTTTACACTGGAGCCCTTATTTCCTGGAACAGCCGATATTGATCAGCTTAGTAGGATTATTAATGTTTTGGGCAACCTCGACGAGAAAGCATGGCCAGGTTGTTCCAAACTTCCCGATTATGGAATAATCTCATTTAGTAAGGTGGAAAACCCTCCTGGGCTTGAAGCTTGCCTGCCCAATCGCTCCCTCGACGAAGTGTCTCTAGTAAAAAAGCTGGTTTGTTATGATCCGGCCAAGAGAGCTACAGCAACGGAGCTACTCCATGACAAGTACTTTAATGAAGAACCTCTTCCTGTTCCGGTTTCAGAGTTGCATGTTCCTTTGAACAGAAAGGGAGAAGATGAAAACTCTCCGTGGCATGATTACAATTACATGGGTTCTGATTCTGACCTGGAGGACTTTGGCCCTGTGAATATCACAAAAACTGcacttcttgttggagctttagtttctggcttcgccaatgttgttcttgacaggctcatttaa 1650 0.4667 MNSSGSDGGNSGGGGGGGGGGDGGRDAYSELRVSLSSHSSVPSLQCFIGFLRSFNYVSLHCLYPSIFIPVSAFHRPFAGGNSLFSRQYDHLHRFSLDHHPRGSGMSVVRVGAGAYADVYRGRRLSDDLIVALKEIHDYQSAFREIDALQILQGSPNVVVLHEYFWREDEDAVLVLEYLRTDLATVIDDAKKKKNGLPVGEIKRWMMQILCGVDSCHRNMIVHRDLKPGNLLIGDDGILKLADFGQARILGEPGFDTSEENPQAYEHDGSSLQAGSGNQEQGTVLREEYFRVLDELKTKRSADDIDKDTNIPDGNTSCLATCTTSDIDDDPLKSSFTYEAREDEGEESGCLTSCVGTRWFRAPELLYGSTNYGLEIDLWSLGCIFAELFTLEPLFPGTADIDQLSRIINVLGNLDEKAWPGCSKLPDYGIISFSKVENPPGLEACLPNRSLDEVSLVKKLVCYDPAKRATATELLHDKYFNEEPLPVPVSELHVPLNRKGEDENSPWHDYNYMGSDSDLEDFGPVNITKTALLVGALVSGFANVVLDRLI 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00553 549 Gene3D Transferase(Phosphotransferase) domain 1 105 277 - -
Aip02g00553 549 Pfam Protein kinase domain 108 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00553 549 Pfam Protein kinase domain 347 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00553 549 MobiDBLite consensus disorder prediction 263 279 - -
Aip02g00553 549 MobiDBLite consensus disorder prediction 251 279 - -
Aip02g00553 549 Gene3D Transferase(Phosphotransferase) domain 1 318 486 - -
Aip02g00553 549 ProSiteProfiles Protein kinase domain profile. 104 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00553 549 MobiDBLite consensus disorder prediction 1 23 - -
Aip02g00553 549 SUPERFAMILY Protein kinase-like (PK-like) 109 485 IPR011009 -
Aip02g00553 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Aip02g00553 549 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Aip02g00553 549 PANTHER CELL DIVISION PROTEIN KINASE 109 499 - -
Aip02g00553 549 PANTHER CYCLIN-DEPENDENT KINASE 10 109 499 - -
Aip02g00553 549 SMART serkin_6 104 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00553 Aip-Chr2 8206373 8220375 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00553 109 530 Core Cell Cycle Gene Families AT4G28980 64.574 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Aip02g00553 Pkinase 1.1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00553 - - ahf:112726382 884.789