Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip02g00543 | ATGGATTCAAAACCATTCCAAGAGATTTTCATCAACCAAAACTGTAATCACTCATTCTGTGATGAATGCATTGCAAAATATGTAGCTGCAAAGATTCAAGAGAATATATCAAATGTGAAGTGTCCTGAACCAAAATGCAGAGAAATATTGGAGCCTCAGAATTGCATGTCAATAATTCCAAAGGAGGTGTTTGAAAGATGGGAGAATGCACTTTGTGAGAATCTTGTTCTTGCAACATCAAAGAAATTCTATTGCTCTTTCAAGGATTGTTCAACAATGTTGGTGAATGATGATGGGAATGAAGTTGTGACTTGTTCTGAGTATCCAAATTGTCATAGATTGTTCTGTGCACAGTGTAAAATTGCATGGCATGGTGGAATGGAATGTGGTGAGTTTATGGGTTTGAATGAAAATGAAAGAGAGAAGGAAGATCTTATGGTGATGAATCTTGCAAAGGATAAGAGATGGAGAAGGTGTGGCCATCGCTTCTGCTATGCTTGTGGAAAGCCATGGAATCAGAAAAGTAATAGGGGGGAGGGGAAGCCAGACAGTTGCTTGATTCAGGTATCAAATTCTTCTTCTGATGAAAGAACACGATCCAGCACACCTCACGCCCAAGTTGGAATCAGGAATAATAGCAATGGAAAGAACGAGAGGGAAGACAGTCCAGATTCACAATCACAAGCTTGGGGTCCCATTCCCAACAAGCTCCAGAAACCCAACCCCACCATGGACCAATCCTCTTCTGAAGCCACCATGAGAAAAGCCCGTGTTTCAGTCTGTGCTCCCTCAGAAGCTCCCATGGTATCTCCCTCTTCTTTATATGGATCGACTAATTAA | 840 | 0.4131 | MDSKPFQEIFINQNCNHSFCDECIAKYVAAKIQENISNVKCPEPKCREILEPQNCMSIIPKEVFERWENALCENLVLATSKKFYCSFKDCSTMLVNDDGNEVVTCSEYPNCHRLFCAQCKIAWHGGMECGEFMGLNENEREKEDLMVMNLAKDKRWRRCGHRFCYACGKPWNQKSNRGEGKPDSCLIQVSNSSSDERTRSSTPHAQVGIRNNSNGKNEREDSPDSQSQAWGPIPNKLQKPNPTMDQSSSEATMRKARVSVCAPSEAPMVSPSSLYGSTN | 279 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip02g00543 | 279 | SUPERFAMILY | RING/U-box | 2 | 74 | - | - | |
Aip02g00543 | 279 | ProSitePatterns | Zinc finger RING-type signature. | 15 | 24 | IPR017907 | - | |
Aip02g00543 | 279 | MobiDBLite | consensus disorder prediction | 224 | 254 | - | - | |
Aip02g00543 | 279 | ProSiteProfiles | TRIAD supradomain profile. | 1 | 265 | IPR044066 | - | |
Aip02g00543 | 279 | MobiDBLite | consensus disorder prediction | 185 | 213 | - | - | |
Aip02g00543 | 279 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 77 | IPR013083 | - | |
Aip02g00543 | 279 | SUPERFAMILY | RING/U-box | 65 | 132 | - | - | |
Aip02g00543 | 279 | PANTHER | RBR-TYPE E3 UBIQUITIN TRANSFERASE | 2 | 160 | - | - | |
Aip02g00543 | 279 | SMART | ibrneu5 | 65 | 129 | IPR002867 | - | |
Aip02g00543 | 279 | Pfam | IBR domain, a half RING-finger domain | 65 | 129 | IPR002867 | - | |
Aip02g00543 | 279 | Pfam | RING-type zinc-finger | 14 | 42 | IPR027370 | - | |
Aip02g00543 | 279 | PANTHER | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING | 2 | 160 | IPR031127 | GO:0004842|GO:0016567 | |
Aip02g00543 | 279 | MobiDBLite | consensus disorder prediction | 174 | 279 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip02g00543 | Aip-Chr2 | 8009703 | 8011668 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip02g00543 | 189 | 270 | WRKY Transcription Factor Family | AT1G62300 | 52.326 | 3.74e-11 | 61.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip02g00543 | K11975 | - | gmx:100815626 | 250.366 |