Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip02g00537 | ATGGAGGGAAGTTCTTCTTCTTCTTCTTCTTCTTCTCTCTCAAAGTCTTTTTCTGATGTAGATGATTCACTACTCTTAGTTGATGATTTCTACTTTTCAGCCCTCTTTGATTCTGAAGAATTATTCCCAATCAATGATGAGAAATATGCAGAGGAACTACATTTACAAGAGGCTCTATATTCTTCTGCTATAAGCCTCAAGAGAAAACTCAAAGAGGTTCATTCTGAATCTTCTACTCATCAATCTCATCATCGTCATCATTATCTTCGTGATGATCAAGTAGTCTTGTGTGCTATTTGCATGGATTCAAAACCATCCAAAGAGATTTTCATCAACCAAAACTGCAACCACTCATTCTGTGATGAATGCATTGCAAAATATGTAGCTGCAAAGATTCAAGAGAATATATCACATGTGAAGTGTCCTGAACCAAAATGCAGAGAAATCATGGAGCCTCAGAATTGCATGTCAATAATTCCAAAGGAAGTGTTTGAAAGATGGGAGAATGCACTTTGTGAGAATCTGGTTCTTGCAACATCAAAGAAATTCTATTGCCCTTTCAAGGATTGTTCAGCAATGTTGGTGAATGATGATGGGAGTGAAGTTGTGACTTGTTCTGAGTGTCCAAATTGTCATAGATTGTTCTGTGCACAGTGTAAAGTTCCATGGCATGGTGGAATGGAATGTGGTGAGTTTATGAGTTTGAATGAAAATGAAAGAGAGAAGGAAGATCTTATGGTGATGAATCTTGCAAAGGATAAGAGATGGAGAAGGTGTTCTAAATGCAGATTCTATGTTGAAAAAAATCAGGGATGTTCACACATTTCTTGCAGGTGTGGCCATCAATTCTGTTATGCTTGTGGAAAGCCATGGAATCAGTACCATGGTTGTACATAA | 897 | 0.3746 | MEGSSSSSSSSSLSKSFSDVDDSLLLVDDFYFSALFDSEELFPINDEKYAEELHLQEALYSSAISLKRKLKEVHSESSTHQSHHRHHYLRDDQVVLCAICMDSKPSKEIFINQNCNHSFCDECIAKYVAAKIQENISHVKCPEPKCREIMEPQNCMSIIPKEVFERWENALCENLVLATSKKFYCPFKDCSAMLVNDDGSEVVTCSECPNCHRLFCAQCKVPWHGGMECGEFMSLNENEREKEDLMVMNLAKDKRWRRCSKCRFYVEKNQGCSHISCRCGHQFCYACGKPWNQYHGCT | 298 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip02g00537 | 298 | ProSitePatterns | Zinc finger RING-type signature. | 115 | 124 | IPR017907 | - | |
Aip02g00537 | 298 | SMART | ibrneu5 | 165 | 229 | IPR002867 | - | |
Aip02g00537 | 298 | SMART | ibrneu5 | 239 | 297 | IPR002867 | - | |
Aip02g00537 | 298 | Pfam | Zinc finger, C3HC4 type (RING finger) | 97 | 142 | IPR018957 | GO:0046872 | |
Aip02g00537 | 298 | Gene3D | - | 232 | 298 | - | - | |
Aip02g00537 | 298 | PANTHER | RBR-TYPE E3 UBIQUITIN TRANSFERASE | 27 | 297 | - | - | |
Aip02g00537 | 298 | SUPERFAMILY | RING/U-box | 91 | 174 | - | - | |
Aip02g00537 | 298 | SUPERFAMILY | RING/U-box | 240 | 297 | - | - | |
Aip02g00537 | 298 | Gene3D | - | 183 | 231 | - | - | |
Aip02g00537 | 298 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 92 | 180 | IPR013083 | - | |
Aip02g00537 | 298 | Pfam | IBR domain, a half RING-finger domain | 250 | 297 | IPR002867 | - | |
Aip02g00537 | 298 | Pfam | IBR domain, a half RING-finger domain | 165 | 229 | IPR002867 | - | |
Aip02g00537 | 298 | PANTHER | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING | 27 | 297 | IPR031127 | GO:0004842|GO:0016567 | |
Aip02g00537 | 298 | SUPERFAMILY | RING/U-box | 165 | 232 | - | - | |
Aip02g00537 | 298 | ProSiteProfiles | Zinc finger RING-type profile. | 97 | 145 | IPR001841 | - | |
Aip02g00537 | 298 | ProSiteProfiles | TRIAD supradomain profile. | 93 | 298 | IPR044066 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip02g00537 | Aip-Chr2 | 7885583 | 7887009 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip02g00537 | 95 | 296 | C3H Transcription Factor Family | AT2G31770 | 28.708 | 1.15e-20 | 90.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip02g00537 | K11975 | - | jre:109004923 | 361.303 |