Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00523 ATGTCTAAGTTAAAACAAGCATTCACCCAACTCACTCATTCTTCCACTAACAACAAGAAGAAAAAGAAGCTCTTCTTGTCTCTCTTCGCCACCCTCCTCCTCGTCGCCTCCGTGGTTGCCATAGTCGCCGGCGTAAACTCCCACAAAAACAACAACTCCTCTTCCTCCTCTTCTCTCGCACTCTCTCACCACTCCCACACCATCATCAAAAACGCTTGCAGCTCCACATTCTACCAAGACCTCTGTTTCTCGGCCGTCTCCTCCGAGCCTGGCGTGACAAACAAGGTCACTTCTCACAAAGATGTCATTGAATTGTCCCTCAACGTTACTTGCAGGACCGTCGAGCACAACTTCTTTGTTATCAAGAAGATTCTCGAGGAGCGGGAGAAGATCCTCACCCACAGGGAGAGGATCGCCCTCCACGACTGCCTTGAGACCATTGACGAGTCCCTTGACGAGCTCCATCAGGCCTACGAGGACATCAAGCTCTATCCTAACTCTAACAAGAAGACTCTCTACCAGCACGCCGATGATCTCAACACTCTTATTAGTGCCGCCATAACCAACCAGGTGACTTGCTTGGACGGTTTCTCGCACGACGCGGCGGACAAGAATGTAAGGAAGGCTCTAGAAGAAGGTCAGGTACACGTGGAGCACATGTGCAGCAACGCATTGGCTATGACGAAGAACATGACCGACACCGACATCGCAAACTACGAACAGAAAATGATGACGACGGCGACGGCGAACGGAGGAAGGAAGTTGATGATGATGGAGGAAGAAGAAGACGAGAAGGGAGTAAAGTGGCCGCAGTGGATGTCGGTTGGTGACAGGAGGCTGTTGCAGGCGGCGACGGTGAAGGCGGACGTTGTGGTGGCGGCGGACGGGAGCGGGAACTTCAAGACAGTGTCGGAGGCGGTGAAGGCGGCGCCGGAGAAGAGTAGCAAGAGGTATGTGATTAAGATCAAAGCTGGTGTATACAGAGAGAATGTTGAAGTGCCGAAGAAGAAGACGAATATAATGTTCTTGGGAGATGGAAGAACCAACACCATTATCACCGGAAGTAGAAACGTTAAAGATGGCGACACCACCTTCAACTCCGCCACCGTCGCCGTTGTGGGACCAAACTTTCTTGCAAGAGACATAACCTTCCAAAACACAGCCGGAGCAGCAAAGCACCAAGCGGTGGCACTTCGAGTCGGTGGCGACCTCTCAGCTTTCTACAACTGCGATATCCTCGCCTACCAAGACACCCTCTATGTCCACAACAACCGTCAATTCTTTGTCAATTGCCTCGTCGTGGGCACCGTCGACTTTATCTTTGGTAATTCAGCCGCAGTTTTTCAAAACTGCGACATCCATGCCCGGCGCCCTGACCCTGGTCAGAAGAACATGGTCACGGCGCAGGGCAGGGTTGACCCTAACCAAAACACCGGAATTGTGATCCAAAAATGTAGGATTGGTGCCACCACGGATTTGGAGCCTGTGAAGAAGAGTTTCCCTACCTACCTTGGTAGGCCATGGAAGGAGTACTCTAGAACCGTGATCATGCAAAGCACCATAAGCGATGTAATTCAACCTGTTGGATGGCATGAGTGGAATGGAGACTTTGCACTAAATACTTTGGTTTATAGAGAGTACCAAAATACTGGGCCTGGTGCTGGTACTTCTGCTAGGGTTACCTGGAAGGGCTATAAGGTAATTACAAATGCTGCTGAGGCCCAGGCTTTTACAGCTGGGGCCTTCATTGGGGGTTCTAATTGGTTGGGCTCAACAGGCTTCCCTTTCTCTCTTGGAAAAACAATGGACACAATCAAGTCCTTCAAGGGATACGGCAAAGTCGATGAGGCCGAGCAACAAGCCTATCAGAAGAAGACACGTAAGCGAATCATAATCCTAATCGTCTCATCACTAATCCTCTCAGCGGCGATTATTGCCGCAGTAGCAGGAATCGTCATACACAAGCGCAACACCAAATCATCATCATCATCTTCTAACTCGGTCCCAACACCCGAGTTAACTCCGGCCGCGTCACTCAAAGCGGTTTGCGATGTGACTCAGTACCCTAACTCGTGCTTCTCCGCCATCTCCGCCGTCGCAAACACCAACACTACTGATCCCAAGCTCCTCTTCCGCCTCTCCCTCGGCGTCGCCATTGACGAGCTCTCCAAGCTCGCGAAGCAGCTTCCCTCNNNNNNNGGGAAGATAACCGATCTGGAAACATGGCTGAGCGCGGCGATAACGAACCAGGAAACGTGCATTGACGCGATCTCCGATGTGGATTCTACCGCTGAGCACGGCGTTGTCGGAGAAGTTCAAACGGCGATGAAGAACTCCACAGAGTACGCGAGCAACAGCTTGGCGATTGTGACGAGGATCTTAGGGCTGATTTCAAAGTTCGATTCGCCGGTGCACCGGCGGCGGTTACTCGGGTTTCCGGAGTGGGTGACGGCGGCGGATAGGAGGCTGCTGGCAGGGAATGTGAACGAAACGGAGACTCGTGTGGTGGTGGCGCAGGACGGAAGCGGTGACTACACCACCATCACGGCGGCGGTGAATGCCGTGAAGAAGAAGAGCTTGAAGAGGCACGTGATTTACGTGAAGACAGGAATTTACAGAGAGAACATCGATTTGGATAAGAACACTTGGAATGTGATGATCTACGGTGATGATAAGACGAAAACCATCGTCACAGGTAACCGGAACTTCATCGACGGCGTTCCTACATTTGAGACTGCCACTTTCGCCGTTAAAGGAAAGGGATTCATAGCTAAAGATATAGGTTTCATAAACACCGCAGGCGCATCGAAGCACCAAGCCGTGGCGCTCCGGTCCGGCTCAGACCGCTCCGTGTTCTACCGGTGCTCATTCATTGGCTACCAAGACACCCTATATGCCCACTCCAACCGCCAATTCTACCGTGAATGTGACATCACAGGCACCATAGACTTCATATTTGGCAATGCAGCAGTTGTGTTCCAAAGCTGCAAGATCATGCCAAGGCAGCCACTCCCAAACCAGTTCAATACCATTACAGCCCAAGGAAAGAAGGACCCTAACCAGAACACTGGCATTGTGATCCAGAAATCCACAATCACTACCCTTGATAAGGACAATCTTACTCTCACTGCCCCAACATACCTTGGTAGGCCATGGAAAGATTACTCCACCACTGTGATCATGCAATCTGAGATTGGCTCATTTTTGAAGCCAATTGGGTGGATAAGTTGGATACCCAATGTAGAACCTCCTAATACCATTTTCTATGCTGAGTACCAGAACAGTGGGCCTGGGTCAGATCTGACCCAGAGGGTTAAATGGGCTGGGTACAAGCCCACTCTCACTGATCTTGATGCAGGAAAGTACACGGTCCAGTCATTCATTCAAGGCCAAGAGTGGCTCAAAGATGCTTCTGTTCAGTTTGAGTCTACTTTATGA 3438 0.5081 MSKLKQAFTQLTHSSTNNKKKKKLFLSLFATLLLVASVVAIVAGVNSHKNNNSSSSSSLALSHHSHTIIKNACSSTFYQDLCFSAVSSEPGVTNKVTSHKDVIELSLNVTCRTVEHNFFVIKKILEEREKILTHRERIALHDCLETIDESLDELHQAYEDIKLYPNSNKKTLYQHADDLNTLISAAITNQVTCLDGFSHDAADKNVRKALEEGQVHVEHMCSNALAMTKNMTDTDIANYEQKMMTTATANGGRKLMMMEEEEDEKGVKWPQWMSVGDRRLLQAATVKADVVVAADGSGNFKTVSEAVKAAPEKSSKRYVIKIKAGVYRENVEVPKKKTNIMFLGDGRTNTIITGSRNVKDGDTTFNSATVAVVGPNFLARDITFQNTAGAAKHQAVALRVGGDLSAFYNCDILAYQDTLYVHNNRQFFVNCLVVGTVDFIFGNSAAVFQNCDIHARRPDPGQKNMVTAQGRVDPNQNTGIVIQKCRIGATTDLEPVKKSFPTYLGRPWKEYSRTVIMQSTISDVIQPVGWHEWNGDFALNTLVYREYQNTGPGAGTSARVTWKGYKVITNAAEAQAFTAGAFIGGSNWLGSTGFPFSLGKTMDTIKSFKGYGKVDEAEQQAYQKKTRKRIIILIVSSLILSAAIIAAVAGIVIHKRNTKSSSSSSNSVPTPELTPAASLKAVCDVTQYPNSCFSAISAVANTNTTDPKLLFRLSLGVAIDELSKLAKQLPXXXGKITDLETWLSAAITNQETCIDAISDVDSTAEHGVVGEVQTAMKNSTEYASNSLAIVTRILGLISKFDSPVHRRRLLGFPEWVTAADRRLLAGNVNETETRVVVAQDGSGDYTTITAAVNAVKKKSLKRHVIYVKTGIYRENIDLDKNTWNVMIYGDDKTKTIVTGNRNFIDGVPTFETATFAVKGKGFIAKDIGFINTAGASKHQAVALRSGSDRSVFYRCSFIGYQDTLYAHSNRQFYRECDITGTIDFIFGNAAVVFQSCKIMPRQPLPNQFNTITAQGKKDPNQNTGIVIQKSTITTLDKDNLTLTAPTYLGRPWKDYSTTVIMQSEIGSFLKPIGWISWIPNVEPPNTIFYAEYQNSGPGSDLTQRVKWAGYKPTLTDLDAGKYTVQSFIQGQEWLKDASVQFESTL 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00523 1145 PANTHER PECTINESTERASE 631 705 - -
Aip02g00523 1145 PANTHER PECTINESTERASE 19 599 - -
Aip02g00523 1145 PANTHER PECTINESTERASE 631 705 - -
Aip02g00523 1145 PANTHER PECTINESTERASE 718 1138 - -
Aip02g00523 1145 ProSitePatterns Pectinesterase signature 1. 859 878 IPR018040 -
Aip02g00523 1145 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 68 232 IPR035513 -
Aip02g00523 1145 Gene3D Invertase/pectin methylesterase inhibitor family protein 64 232 IPR035513 -
Aip02g00523 1145 SMART PMEI_2 674 789 IPR006501 GO:0004857
Aip02g00523 1145 SMART PMEI_2 64 227 IPR006501 GO:0004857
Aip02g00523 1145 CDD PMEI-like_3 681 793 - -
Aip02g00523 1145 Pfam Pectinesterase 835 1130 IPR000070 GO:0030599|GO:0042545
Aip02g00523 1145 Pfam Pectinesterase 289 585 IPR000070 GO:0030599|GO:0042545
Aip02g00523 1145 Gene3D - 283 600 IPR012334 -
Aip02g00523 1145 Gene3D - 828 1145 IPR012334 -
Aip02g00523 1145 ProSitePatterns Pectinesterase signature 2. 433 442 IPR033131 -
Aip02g00523 1145 PANTHER PECTINESTERASE 718 1138 - -
Aip02g00523 1145 PANTHER PECTINESTERASE 19 599 - -
Aip02g00523 1145 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 679 794 IPR035513 -
Aip02g00523 1145 ProSitePatterns Pectinesterase signature 2. 978 987 IPR033131 -
Aip02g00523 1145 SUPERFAMILY Pectin lyase-like 834 1141 IPR011050 -
Aip02g00523 1145 SUPERFAMILY Pectin lyase-like 284 599 IPR011050 -
Aip02g00523 1145 Gene3D Invertase/pectin methylesterase inhibitor family protein 716 794 IPR035513 -
Aip02g00523 1145 TIGRFAM PME_inhib: pectinesterase inhibitor domain 55 231 IPR006501 GO:0004857
Aip02g00523 1145 CDD PMEI-like_3 72 232 - -
Aip02g00523 1145 Pfam Plant invertase/pectin methylesterase inhibitor 68 227 IPR006501 GO:0004857
Aip02g00523 1145 Pfam Plant invertase/pectin methylesterase inhibitor 736 789 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00523 Aip-Chr2 7690559 7702971 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00523 14 599 Carbohydrate Esterase AT3G14310 68.500 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00523 K01051 - pvu:PHAVU_010G123100g 1642.86