Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00476 ATGGTCATGCTCATTAGCCATGCCAACCCAAAAATCTCTCACCACATTGGTTCTTCTCTTCCCTTGTGTTCCCCTCTTCCTTCTTCTTCTTCATCTTCATCACCATCACCACCAACAACAATCACCTTCATCATCACTTCAACTTCAACAACTTTTTCATGTTGTAACAAGAATGATAGAGATTCTTTATTGGCCTTGTATGCCAACATATCAATCTCTTCCACACATGGTTCTCTCAATTGGTCAAATTCTTCTGATTGCTGCAAATGGGAAGGGATTACCTGTGATTCGGATCTCAGAGTCACACATCTTGAGCTTCCATTTAGAGGATTATTCGGACGAATTTCGCCATCTCTGACCGGTCTTGAAGGTCTATCATACCTTAATCTGTCACATAATCAGTTATCTGGTAACCTCCCTGACCACCTATACCAACTGTTTGATCATTTGCTTGTTCTTGATTTAAGCTATAATAGGCTTTCTGGTGAATTGCCAGAATCACCCTTTGTTGATAGTAACAAAACTAGCAATAGAAATACAAATACAAGTGTTGTGATTCAGGAGATTGATTTGTCTAGTAATTTGTTCAATGGAACATTGAAACATTCTCTCATTCAGCATATAGCAGGAGGAGGGAATTTGGTGTATTTCAATGTTAGCAATAACAGCTTCACAGGTCAAATTCCAACTTCACTCTTTTGCATCAATGATCATAACTCCTCGGCTTTGAGATCCCTGGACTTTTCCTACAATGATTTTGGTGATACTATTCAGCCAGGGCTCGGAGCGTGTTCAAAGCTCGAGAAGTTTAGAGCAGGATTCAATGAACTAACTGGGAATCTCCCAGTTGATGTCTTTGATGCTGTTTCTTTGACAGAAATCTCTTTGCCCCGGAACAAGCTTGGTGGAACAATCGACAATGACATTGTTCGCCTCACGAACCTCACAGTTTTGGAGCTATACTCCAATAATTTAACAGGAAAAATTCCACCAAGGATTGGTGAACTCATCAAATTGCAGAGTTTGCTCCTTCATGTTAACAACTTGACTGGTACCTTGCCCCAATCTATGATGAACTGTGCCAATCTTCTTGTGTTGAATTTAAGGGTCAACTTATTGGAAGGGAATCTCTCAGCATTCAACTTCTCAAGATTCCTTAAACTCACAACACTTGATCTTGGCAACAATAACTTCAGTGGTATCTTGCCACCAACACTCTATGCATGCAAGAATCTTACAGCTGTGAGATTAGCGTTCAATAATCTCGAGGGACAGATTTCGCATGAGATTATTGGCCTTCAATCCCTTTCTTTCCTAGCAGTTTCAAGGAACCAGCTGCAAAACATCACGGGGGCTCTGCGAATTCTCACAGGGCTAAAGGAGCTTAAAACTCTGATGCTCTCAAAAAATTTCTTCTATGAAAAGTTACCTAGTGATGTTGACATAGCAGACACAGGTGGATTCCAGAAGCTCCAAGTTTTAGGACTTGGAGGTTGTAGTTTCACCGGCGAAATACCAGGCTGGCTTGTGAACCTGACAAAGCTTGAGGTCTTGGACCTGTCCTTTAACGAAATCAGTGGTTCGATTCCTCCCTGGTTAGGTACACTTCCTCAGCTTTTCTACCTGGACTTGTCTGTTAACCACCTTACAGGAATATTTCCTATTGAGCTTACAAGGCTGCCAGCACTGATATCACAACAGGCGAATGATAAAGTCGAAAGAGCTTACTTGGAGTTACCGGTTTTTGCCGATGCCAACAATGTTTCCCAGATGCAATATAATCAGCTTTCCAATCTGCCACCAGTGATGTATCTGGGACGGAACAGACTCAGTGGCAGTATTCCAATTGAGATTGGAAATTTGAAGGTCCTTCATCAGCTGGATTTGAAGAGCAACAACTTCTCTGGCAATATACCATCTGAGATTTCAAGCTTGGTTAACTTAGAGAAACTAGACCTCTCCGGAAACCATTTATCTGGCGAAATTCCTGATTCGCTCAAGGTGCTGCATTTCTTGTCTTTTTTCAGTGTAGCAAACAATAATCTCCAAGGACGGATACCAACTGGTGGACAATTTGATACATTCTCCTCCTCCAGCTTTGAAGGGAATGCGCAATTGTGTGGCACAGTGATTCAGCACTCTTGTCCTACTCAAAAAAATTCTAACAGCACTGAAGCTCATCGTGGCACAAACAGAAAAGTAATATTAGGACTTATTATTGCAGTGTGTTTTGGCACTGGTTGCATCATGACAGTGCTGACACTTTGGATACTCTCCAAGAGAAGGATCAATCCCGGAGAAGACCATGACAAGATCGAACTGGGATCGGTTTCTCCATACTCCAACAGTGGTGTTCATCCTGAGGTTGACAAGGAGGCCAGCCTAGTGGTATTGTTCCCAAACAAAGCGAACGAAACCAAGGATCTTACCATATTTGAGATCTTGAAAGCAACTGAGAATTTCAGCCAGGCAAACATAATAGGATGTGGTGGATTCGGTTTGGTTTACAAGGCAACATTACCAAATGGAATTACACTAGCCATCAAGAAGCTTTCAGGGGATTTAGGCCTCATGGAGAGGGAATTTAAGGCAGAGGTAGAGGCTTTGTCCACAGCACAACATGAGAATCTGGTGGCACTGCAAGGCTATTGTGTCCATGATGGATTTCGGCTTCTGATGTATACTTACATGGAGAATGGAAGTCTTGATTACTGGCTGCATGAAAAGGCCGATGGCGCATCTCAACTTGATTGGCCGACTCGTTTAAAGATTGCACAAGGGGCAAGCTGTGGTTTGGCCTATTTGCATCAGATATGCGAGCCACATATTGTGCATCGTGATATAAAGTCAAGCAATATACTCCTCGACGAAAAGTTTGAGGCACATGTTGCTGATTTTGGCTTGTCCAGGTTGATTCTTCCTTATCAAACTCATGTCACAACTGAACTTGTAGGCACATTAGGATACATTCCCCCTGAGTATGGACAAGCATGGGTGGCAACTCTACGAGGAGATGTGTATAGCTTTGGAGTTGTCATGCTAGAGCTTCTCACCGGAAGAAGACCGGTCGATGTATGCAAGCCGAAAATGTCAAGAGAGTTGGTTGCTTGGGTTCAACAAATGAGAATTGAAGGGAAAGAAGATCAAGTTTTTGACCCTCTTTTGAGAGGAAAAGGCTATGAAGCAGAGATGCTGCAAGTTCTTGATGTGGCATGTATGTGTGTCAGCCACAATCCTTTCAAGAGACCAAGCATCAGAGAAGTTGTTGAATGGTTGAAGAATGTAGGATTGTCCAAGCGAACAACATAG 3309 0.4249 MVMLISHANPKISHHIGSSLPLCSPLPSSSSSSSPSPPTTITFIITSTSTTFSCCNKNDRDSLLALYANISISSTHGSLNWSNSSDCCKWEGITCDSDLRVTHLELPFRGLFGRISPSLTGLEGLSYLNLSHNQLSGNLPDHLYQLFDHLLVLDLSYNRLSGELPESPFVDSNKTSNRNTNTSVVIQEIDLSSNLFNGTLKHSLIQHIAGGGNLVYFNVSNNSFTGQIPTSLFCINDHNSSALRSLDFSYNDFGDTIQPGLGACSKLEKFRAGFNELTGNLPVDVFDAVSLTEISLPRNKLGGTIDNDIVRLTNLTVLELYSNNLTGKIPPRIGELIKLQSLLLHVNNLTGTLPQSMMNCANLLVLNLRVNLLEGNLSAFNFSRFLKLTTLDLGNNNFSGILPPTLYACKNLTAVRLAFNNLEGQISHEIIGLQSLSFLAVSRNQLQNITGALRILTGLKELKTLMLSKNFFYEKLPSDVDIADTGGFQKLQVLGLGGCSFTGEIPGWLVNLTKLEVLDLSFNEISGSIPPWLGTLPQLFYLDLSVNHLTGIFPIELTRLPALISQQANDKVERAYLELPVFADANNVSQMQYNQLSNLPPVMYLGRNRLSGSIPIEIGNLKVLHQLDLKSNNFSGNIPSEISSLVNLEKLDLSGNHLSGEIPDSLKVLHFLSFFSVANNNLQGRIPTGGQFDTFSSSSFEGNAQLCGTVIQHSCPTQKNSNSTEAHRGTNRKVILGLIIAVCFGTGCIMTVLTLWILSKRRINPGEDHDKIELGSVSPYSNSGVHPEVDKEASLVVLFPNKANETKDLTIFEILKATENFSQANIIGCGGFGLVYKATLPNGITLAIKKLSGDLGLMEREFKAEVEALSTAQHENLVALQGYCVHDGFRLLMYTYMENGSLDYWLHEKADGASQLDWPTRLKIAQGASCGLAYLHQICEPHIVHRDIKSSNILLDEKFEAHVADFGLSRLILPYQTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGRRPVDVCKPKMSRELVAWVQQMRIEGKEDQVFDPLLRGKGYEAEMLQVLDVACMCVSHNPFKRPSIREVVEWLKNVGLSKRTT 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00476 1102 ProSitePatterns Protein kinases ATP-binding region signature. 827 850 IPR017441 GO:0005524
Aip02g00476 1102 SUPERFAMILY Protein kinase-like (PK-like) 807 1092 IPR011009 -
Aip02g00476 1102 Pfam Leucine Rich Repeat 387 407 IPR001611 GO:0005515
Aip02g00476 1102 Pfam Leucine Rich Repeat 647 669 IPR001611 GO:0005515
Aip02g00476 1102 PANTHER OS02G0155400 PROTEIN 42 1093 - -
Aip02g00476 1102 Pfam Protein kinase domain 822 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00476 1102 SUPERFAMILY RNI-like 128 559 - -
Aip02g00476 1102 PRINTS Leucine-rich repeat signature 150 163 - -
Aip02g00476 1102 PRINTS Leucine-rich repeat signature 645 658 - -
Aip02g00476 1102 Gene3D Ribonuclease Inhibitor 286 382 IPR032675 -
Aip02g00476 1102 SUPERFAMILY L domain-like 591 707 - -
Aip02g00476 1102 Gene3D Phosphorylase Kinase; domain 1 786 896 - -
Aip02g00476 1102 SMART LRR_typ_2 312 336 IPR003591 -
Aip02g00476 1102 SMART LRR_typ_2 645 669 IPR003591 -
Aip02g00476 1102 SMART LRR_typ_2 512 536 IPR003591 -
Aip02g00476 1102 SMART LRR_typ_2 147 171 IPR003591 -
Aip02g00476 1102 SMART LRR_typ_2 433 455 IPR003591 -
Aip02g00476 1102 SMART LRR_typ_2 459 483 IPR003591 -
Aip02g00476 1102 SMART LRR_typ_2 385 409 IPR003591 -
Aip02g00476 1102 SMART LRR_typ_2 122 146 IPR003591 -
Aip02g00476 1102 Gene3D Ribonuclease Inhibitor 183 237 IPR032675 -
Aip02g00476 1102 Gene3D Ribonuclease Inhibitor 58 182 IPR032675 -
Aip02g00476 1102 Gene3D Ribonuclease Inhibitor 238 285 IPR032675 -
Aip02g00476 1102 ProSiteProfiles Leucine-rich repeat profile. 514 537 IPR001611 GO:0005515
Aip02g00476 1102 ProSitePatterns Serine/Threonine protein kinases active-site signature. 943 955 IPR008271 GO:0004672|GO:0006468
Aip02g00476 1102 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 42 1093 - -
Aip02g00476 1102 Pfam Leucine rich repeat N-terminal domain 57 96 IPR013210 -
Aip02g00476 1102 SMART serkin_6 821 1092 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00476 1102 Gene3D Ribonuclease Inhibitor 383 724 IPR032675 -
Aip02g00476 1102 ProSiteProfiles Leucine-rich repeat profile. 647 669 IPR001611 GO:0005515
Aip02g00476 1102 ProSiteProfiles Protein kinase domain profile. 821 1097 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00476 1102 Pfam Leucine rich repeat 490 549 IPR001611 GO:0005515
Aip02g00476 1102 Gene3D Transferase(Phosphotransferase) domain 1 897 1101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00476 Aip-Chr2 6766070 6769511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00476 53 752 Miscellaneous Gene Families AT1G17240 50.496 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Aip02g00476 Pkinase 9.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00476 - - gmx:100781943 1635.54