Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00465 ATGGCAGAAACTAGGGTTCTACCTGTTGGATATAGGTTTCGTCCAACAGAAGAGGAACTTTTAATTCACTATCTCAATAACAAGCATTTGGGAAATGATGCAGAGATTAAGAACACTATTTCCCAAGTTGATCTTTGTAACTTTGATCCTTGGGATTTGCCAGAACAATCGAAGGTGAAATCGGATGATCAAGAATGGTTTTTCTTCAATGAATTGAAATACATGAAAAACAAGCGATGTAACAGAAAAACCAACATGGGATATTGGAAGATCACAGGAAAAGAGAGAATCATCAAAAGAACAGGGACAGACAGTGTCATAGGTACAAAAAGAACACTAGTTTTCTACAAGCGTCCACATAATGTCAAAACCAATTGGGTTCTTCATGAATATCATGCACTTCATCAAAAGAGCAACATCGTGTTGAGCCGTGTAACAATGAATGCTGAGAAAAGGGAAAAGAAGCTCAAGACAAAAGCAAGCAACATAATCGAAGAGGAAGTAAAATGTGAAGATGAACCATGCAGCGAAATTACTGGCTGTGTTACCCAAGCAACTACAGAAGATGCAATCCTTCCTGATAATGCATGTGTTTCATCCGAGTGGCAACAACCTCAAGCTATGGACTATGAAATTCTCTCATCGGGACAACGATCTTCAGTGGCCTATTCCGGTAATGAAAACAATGCCGCGTTGCTTCCAATGGAAGCAACGTGGAGGCAAGATGCCGGTATGAATACCGAGTGTTTTTGGAATTCGCTGTTTTCTAGCATCGATGCTGACCCTCATGCCGAGTTCTTAAATTCAGTGTTGGCAGGGGATGATCAACTCTATGTTGATTCCGGCCACCATTGA 855 0.407 MAETRVLPVGYRFRPTEEELLIHYLNNKHLGNDAEIKNTISQVDLCNFDPWDLPEQSKVKSDDQEWFFFNELKYMKNKRCNRKTNMGYWKITGKERIIKRTGTDSVIGTKRTLVFYKRPHNVKTNWVLHEYHALHQKSNIVLSRVTMNAEKREKKLKTKASNIIEEEVKCEDEPCSEITGCVTQATTEDAILPDNACVSSEWQQPQAMDYEILSSGQRSSVAYSGNENNAALLPMEATWRQDAGMNTECFWNSLFSSIDADPHAEFLNSVLAGDDQLYVDSGHH 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00465 284 ProSiteProfiles NAC domain profile. 7 148 IPR003441 GO:0003677|GO:0006355
Aip02g00465 284 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 168 - -
Aip02g00465 284 SUPERFAMILY NAC domain 4 146 IPR036093 GO:0003677|GO:0006355
Aip02g00465 284 Gene3D NAC domain 16 154 IPR036093 GO:0003677|GO:0006355
Aip02g00465 284 Pfam No apical meristem (NAM) protein 8 132 IPR003441 GO:0003677|GO:0006355
Aip02g00465 284 PANTHER FACTOR, PUTATIVE-RELATED 8 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00465 Aip-Chr2 6591131 6594742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00465 6 133 NAC Transcription Factor Family AT1G33060 51.515 1.08e-39 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip02g00465 NAM 3.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00465 - - aip:107626709 586.26