Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00458 ATGATGCATATTATTATTGGTTTAGAACTTCTTGTGTTCTTACCTTTTTCTTGTTCTCTCCAACCACCTAATTTGCTTCCAAATCCTTGCAATGAAACTTGTGGAAAACTCCATGTTCCTTTCCCATTCTTTGTCAACTCTTCTTGTGCCTCAATCTCAACTTCTTTCAACCTTTCTTGTTCAAACTCCTCTAACCTTTTCCTCAAAATTGATTCACAAAGTTACAAGGTTTTAGAGTTCTTCAATGATGGCTTGTTGGTGGACTTTCCAGCAGGCGCATCGTCGTCTTCGACTTGCCGAATGTACAATGACTTGAACTCATTTGGGAAAAGTTTTGAAGGAAAAGATGAAGATCAGTATGGAATCTCATTGGACAATGTTGTTGGACTCTATGATTGTGATGACTCCTCAGTATGCAAACCAGATTGTGAAACAATTGAGCTTCCAGGGTGTGATGGAAGTGGCAACAACCTTGGATGCTGTTATCCACTGAGTGATCATAGCATATGGCACAGTGGTGAAGGGTTCTCAGTGTTCTCTGAATTTGGATGCAGAGGGTTCTCAAGTTGGGCTGTTGTTAGAGGATCTAATTCAGGAAAACATGGGGTGAAGTTGGAATGGGGTGTTCCTTTGAAGAAGAATTCATCATCAATGGAGAAAGTTTGTGATTTCAATGCAGAAATGGTGAATGCTAGTTCAGTTCAAGGTGCAGTTAGGTGTGTTTGTCAAGATGGATTTCTTGGTGATGGTTTTCTTAATGGATCAGGATGCTTGCAATCTTGTATGAAGAATGGACAGGAAGCATATGGAGACAACTGTTACATCAAAAAACATGATCAAAGGAAAATGCTCATCATTGTAGGAATCCTGGGTCCATTTCTCATTGTTGCTTCATTGATTACACTATTCTATCTTCTCAAAAAACCAGCAACAAAGCCAGGAATGTTTGACACAGAGCAGGCCTATTACCACAGCATTTCGTTCCGAAAACCGAATCGAACTCGCCTGTTCAGCCACCATGATCTAGACAAAGCCACCAAAGGTTTTGAAGAAGGACAGAAGCTTATGAGTGGAGCAGCCGGGTCGATTTTCGCCGGAGTTCTGGGCGACGGATCCCACATAGCAGTTCAGAAGCTAAAATGTGAGAATGAGAAGGACATAATCCAAGTTGTATCACAAATTGAGATTCTATCAAACATTGTGCATAGGAACATGGCTTGTGTTCTTGGATGTTGCATTGAATCTAGTTACACTCCTCTAGTGGTTTATGAGTACCCTGCTAATGGAACATTAGAGGAGCATTTGAATCATGAATTCAAAGGAAATAATGGAATTGGTTTGGATTGGTATAGAAGATTGATCATAGCTACTGAAACAGCTTACATTCTTGCATTCTTGCACTATGAGAATTCCCCTCCAATTTTCCACAACAATCTAAAATCTAGCTGCATTTTCTTGGATGATGATCTCTCAGTCAAGATTGCAGGGTTCGGCCTACTCAATTCTAAATTCAAGTATGAATCTCATCACTTTTGCAAGAATGATGTCTATGACATGGGATTGCTTCTACTTGAGATCATCTCAGGCTCAAACTCGACTCACCAGAAGTCTCCGCCTACGTCGGCTTTGGAGAAAATAAGGGATGGGAAGCTAGAAGAGATTGTTGATCCTCTCCTTTCGTATCACGAGATGGCGCAGCTCCGGCGAGATCAGGTGCAGATTGTGGCAGACCTTGCAACAAGGTGTATGCTATTTGGTGGAGATGGAAAGATTGGAATGGTTGATGTTGTAAGAGAATTGGTGCACATAACAAAACAGAGTGGTGATGCTGGCAATTTGAATTTCTTGGAGGAAACATTCTCAAATTCAAGCCTTCTTCAAATGATTTCAATGTCTCCTGATTCTATCATTGTTCATTGA 1920 0.4078 MMHIIIGLELLVFLPFSCSLQPPNLLPNPCNETCGKLHVPFPFFVNSSCASISTSFNLSCSNSSNLFLKIDSQSYKVLEFFNDGLLVDFPAGASSSSTCRMYNDLNSFGKSFEGKDEDQYGISLDNVVGLYDCDDSSVCKPDCETIELPGCDGSGNNLGCCYPLSDHSIWHSGEGFSVFSEFGCRGFSSWAVVRGSNSGKHGVKLEWGVPLKKNSSSMEKVCDFNAEMVNASSVQGAVRCVCQDGFLGDGFLNGSGCLQSCMKNGQEAYGDNCYIKKHDQRKMLIIVGILGPFLIVASLITLFYLLKKPATKPGMFDTEQAYYHSISFRKPNRTRLFSHHDLDKATKGFEEGQKLMSGAAGSIFAGVLGDGSHIAVQKLKCENEKDIIQVVSQIEILSNIVHRNMACVLGCCIESSYTPLVVYEYPANGTLEEHLNHEFKGNNGIGLDWYRRLIIATETAYILAFLHYENSPPIFHNNLKSSCIFLDDDLSVKIAGFGLLNSKFKYESHHFCKNDVYDMGLLLLEIISGSNSTHQKSPPTSALEKIRDGKLEEIVDPLLSYHEMAQLRRDQVQIVADLATRCMLFGGDGKIGMVDVVRELVHITKQSGDAGNLNFLEETFSNSSLLQMISMSPDSIIVH 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00458 639 Pfam Wall-associated receptor kinase galacturonan-binding 30 80 IPR025287 GO:0030247
Aip02g00458 639 Gene3D Phosphorylase Kinase; domain 1 321 425 - -
Aip02g00458 639 Gene3D Transferase(Phosphotransferase) domain 1 427 506 - -
Aip02g00458 639 Gene3D Transferase(Phosphotransferase) domain 1 507 605 - -
Aip02g00458 639 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 39 634 IPR045274 GO:0007166
Aip02g00458 639 SUPERFAMILY Protein kinase-like (PK-like) 328 600 IPR011009 -
Aip02g00458 639 ProSiteProfiles Protein kinase domain profile. 349 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00458 639 Pfam Protein tyrosine and serine/threonine kinase 351 504 IPR001245 GO:0004672|GO:0006468
Aip02g00458 639 PANTHER OS10G0351500 PROTEIN 39 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00458 Aip-Chr2 6479661 6482749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00458 29 603 Receptor kinase-like Gene Family AT2G23450 29.630 1.95e-60 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-3 Aip02g00458 PK_Tyr_Ser-Thr 5.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00458 - - gmx:100779880 835.484