Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00457 ATGGACGCGTACTCCTCTGGAGAGGAAGTGGTTATTAAGACTAGGAAACCTTATACAATCACCAAGCAAAGAGAACGATGGACAGAGGAGGAGCATAACCGATTTCTAGAAGCTTTGAAGCTCCATGGGCGGGCATGGCAGCGAATAGAAGAGCATATTGGAACAAAAACTGCCGTGCAGATCAGGAGCCATGCGCAGAAGTTCTTTACAAAGTTGGAGAAAGAGGCCCAGGCAAAGGGTGTTCCAATTGGACAAGCTCTTGACATAGAAATCCCCCCTCCACGACCCAAAAGAAAACCGAGCAATCCTTATCCTCGGAAGACCAGTGCTGGTGTCGCATCATTGCATAGTGGAGCAAAGGATGGAAAACTCAGTTCTCTTGAATCTTCACATGCTAAACAAGCACTGGACTTGGAAAAGGAACCTGTCCCAGAGAAACATAATGGAGACAAAGTGTCACATGTAAAAGAAAATAAGGATGAGAACTGCTCTAAAGTATTTACTCTTCTCCAGGAGTTACCATGTTCTTCGGTTTCTTCAGCAAACAAGAGTTCAATATCGTGGTCAGTGCCACTGCAAAATTCATGCGGCTTAAGGGAGATTATACCTTCAGTGAAAGAGGTAATAGCGAAAGATGGAACAAATAAATCTTTTGTTACTATTGAACTTGAAAATCGGAAGTTGGAGATAGATGATGGGAAGCAGACTAATGGAAACTCCAGTTTGGAGAATTCTGATACAGTGAAATTGGTTCAAAATGAAAAAACAGATGGTCTTAACTGTGAACTAACCATAGATGGGATACAAGGCAATCAGAATTATCCGAGACATGTTACTGTGCACGTTGTTGATGGGAAACTCAGAACAAGTACTGCAAATCCATCCCAAGATATGGTGTTTCAAGATTCTATGTTTCAGCCACTAGGAGGGATTAATGGGCAACCTAATCTTTTCACCAATTCAACCGTATCAAACACGAGCGAGAGCCAAAACAACACAGAGAGATCTTCTGTTCATCAATCATTTCTTCCTTACCCTCCCTTCATACAAAATAATCAAGGCGATTACCAATCATTTCTTCAAATGTCTTCCACATTTTCAAGTCTTGTTGTGTCTACCTTGCTGCAAAACCCAGCAGCACATGCTGCCGCAAGTTTTGCAGCTACTTTCTGGCCCTGTGCAAATTCAGAAGCTTCAGCAGATTCTCCTACGTGCTCTCAAGGAGGTTTTCCACCCAGACAGAATGGCTCTCCTCCAAGTGTGGCGGCTATTGCAGCCGCCACTGTAGCTGCTGCAACTGCATGGTGGGCTGCCCATGGACTGCTTCCTATGTGTGCTCCACTCCATACTGCTTTTGCTTGTCCTCCAACATCAATGCCTGCAGTTCCATCAATGAATACTGGTGAAGCACCAGCACCAGCACCGGTACAAGAACCGGCACCAATACCAACATCAGAGACAGAACAAGAGAAGAATAGTCTGCAAAATCCTCCTCAGCAGGACCAGACACTTGATCCTGTATGCTCGGAAGCTCAACAAGCACAACAGTCACCTTCTAAGTCCCCAGTTGATATCTCATCAGATTCTGAGGAGAGTGGAGATGCCAAGTTACATGCTTCGCCGTCCAAGGCTACTGATCAAGAGTTGAACAAAGAAATATCCGAGCACATTGATTCCAACAAAGCAAAAGGTAGAAAACCAGTTGACCGATCCTCATGTGGTTCCAACACAACCTCTAGCAGCGAATTGGAGACTGATGCATTAGAGAAGGATGAGCAAGGGAAGGAAGAGCCTGAAACAGCTGATGCTAACAATTTAGCCATTGACTCTAGTAATCGTCGTAGTAGAAGTGTTAGCAACCTTACTGATTCTTGGAAAGAGGTCTCCGAGGAGGGGCGACTGGCCTTTCGGGCTCTCTTTGCCAGAGAGGTGTTGCCACAAAGCTTTTCGCCTCCGCCCGATTTGCTAAACAAGGATCAGGAAATGGACAGCATCAAGGATAACAAGCAAACCACAGATATCAAGGATGAAGGCCAAGACAGCAAGAAATGCAGTTCTATTTTCGAGGGTATTCAGAAAATGATGCCATGTATAGAGAATAATGAGGAAGAGGGACTGCTAACCATAGGACTTGGACAAGGAAAGCTCAAGACTCGTCGGACCGGCTTCAAACCTTACAAAAGATGTTCAATGGAGGCCAAGGAGAACAGGGTTGGGAGCACGGGGAACCAAGGTGAAGAGCAAGGGTCAAAGAGAATACGCTTAGAAGGGGAGGCTTCAACTTGA 2286 0.4514 MDAYSSGEEVVIKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEAQAKGVPIGQALDIEIPPPRPKRKPSNPYPRKTSAGVASLHSGAKDGKLSSLESSHAKQALDLEKEPVPEKHNGDKVSHVKENKDENCSKVFTLLQELPCSSVSSANKSSISWSVPLQNSCGLREIIPSVKEVIAKDGTNKSFVTIELENRKLEIDDGKQTNGNSSLENSDTVKLVQNEKTDGLNCELTIDGIQGNQNYPRHVTVHVVDGKLRTSTANPSQDMVFQDSMFQPLGGINGQPNLFTNSTVSNTSESQNNTERSSVHQSFLPYPPFIQNNQGDYQSFLQMSSTFSSLVVSTLLQNPAAHAAASFAATFWPCANSEASADSPTCSQGGFPPRQNGSPPSVAAIAAATVAAATAWWAAHGLLPMCAPLHTAFACPPTSMPAVPSMNTGEAPAPAPVQEPAPIPTSETEQEKNSLQNPPQQDQTLDPVCSEAQQAQQSPSKSPVDISSDSEESGDAKLHASPSKATDQELNKEISEHIDSNKAKGRKPVDRSSCGSNTTSSSELETDALEKDEQGKEEPETADANNLAIDSSNRRSRSVSNLTDSWKEVSEEGRLAFRALFAREVLPQSFSPPPDLLNKDQEMDSIKDNKQTTDIKDEGQDSKKCSSIFEGIQKMMPCIENNEEEGLLTIGLGQGKLKTRRTGFKPYKRCSMEAKENRVGSTGNQGEEQGSKRIRLEGEAST 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00457 761 PANTHER SWI/SNF COMPLEX-RELATED 2 743 - -
Aip02g00457 761 MobiDBLite consensus disorder prediction 133 157 - -
Aip02g00457 761 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Aip02g00457 761 MobiDBLite consensus disorder prediction 604 625 - -
Aip02g00457 761 MobiDBLite consensus disorder prediction 732 761 - -
Aip02g00457 761 SMART sant 23 71 IPR001005 -
Aip02g00457 761 Gene3D - 26 73 - -
Aip02g00457 761 MobiDBLite consensus disorder prediction 482 526 - -
Aip02g00457 761 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Aip02g00457 761 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Aip02g00457 761 PANTHER PROTEIN LHY 2 743 - -
Aip02g00457 761 MobiDBLite consensus disorder prediction 548 568 - -
Aip02g00457 761 MobiDBLite consensus disorder prediction 584 599 - -
Aip02g00457 761 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Aip02g00457 761 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Aip02g00457 761 MobiDBLite consensus disorder prediction 83 157 - -
Aip02g00457 761 CDD SANT 26 69 IPR001005 -
Aip02g00457 761 MobiDBLite consensus disorder prediction 464 626 - -
Aip02g00457 761 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00457 Aip-Chr2 6460160 6465353 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip02g00457 Myb_DNA-binding 2.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00457 K12133 - gmx:100101859 1084.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00457 02 6460160 6465353 Aip02g00457 02 6460160 6465353 ECH